RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ADARB2Q9NS39 739 aaKnown RBP6.24□□□□□ -1.41
SF3B1-210ENST00000482158 TBX20Q9UMR3 447 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 CYP2D7A0A087X1C5 515 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 CXorf65A6NEN9 183 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 TFEBP19484 476 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 GJC1P36383 396 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 PGM1P36871 562 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 OAZ1P54368 228 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 TBL3Q12788 808 aaKnown RBP6.23□□□□□ -1.41
SF3B1-210ENST00000482158 AP5B1Q2VPB7 878 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 C10orf76Q5T2E6 689 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 PAPD7Q5XG87 772 aaKnown RBP6.23□□□□□ -1.41
SF3B1-210ENST00000482158 LRRC8DQ7L1W4 858 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 UBE2Q1Q7Z7E8 422 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 TSPYL6Q8N831 410 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 FAM47BQ8NA70 645 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 BCAS4Q8TDM0 211 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 KAT2BQ92831 832 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 ELP4Q96EB1 424 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 FUZQ9BT04 418 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 UBA5Q9GZZ9 404 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 PAIP1Q9H074 479 aaKnown RBP6.23□□□□□ -1.41
SF3B1-210ENST00000482158 LMAN2LQ9H0V9 348 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 FLRT1Q9NZU1 646 aa6.23□□□□□ -1.41
SF3B1-210ENST00000482158 CCDC196A0A1B0GTZ2 297 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 SMIM35A0A1B0GVV1 85 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 CGB1A6NKQ9 187 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 PPP6CO00743 305 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 EPB41L2O43491 1005 aaKnown RBP6.22□□□□□ -1.41
SF3B1-210ENST00000482158 ATP5F1P24539 256 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-210ENST00000482158 CCT4P50991 539 aaKnown RBP6.22□□□□□ -1.41
SF3B1-210ENST00000482158 GALNT2Q10471 571 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 IL13RA2Q14627 380 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 DAZAP2Q15038 168 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-210ENST00000482158 BAK1Q16611 211 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 VWA5B1Q5TIE3 1220 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 GJB7Q6PEY0 223 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 KLBQ86Z14 1044 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 PCYOX1LQ8NBM8 494 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 SETD9Q8NE22 299 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 TBC1D22AQ8WUA7 517 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 DDB2Q92466 427 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 RNF125Q96EQ8 232 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3B1-210ENST00000482158 SLC26A6Q9BXS9 759 aa6.22□□□□□ -1.41
SF3B1-210ENST00000482158 MASP2O00187 686 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 TULP3O75386 442 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 BCAR3O75815 825 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 CD4P01730 458 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 IFIT1P09914 478 aaKnown RBP6.21□□□□□ -1.42
SF3B1-210ENST00000482158 TNFAIP3P21580 790 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 CD72P21854 359 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 PRKCHP24723 683 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 PTPN9P43378 593 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 INHBEP58166 350 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 TDGQ13569 410 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 PRICKLE4Q2TBC4 344 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 PLK5Q496M5 336 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 FBXO43Q4G163 708 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 KIAA1614Q5VZ46 1190 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 MIS18BP1Q6P0N0 1132 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 RUFY2Q8WXA3 655 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 NCSTNQ92542 709 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 SCNM1Q9BWG6 230 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 TTYH1Q9H313 450 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-210ENST00000482158 ZNF304Q9HCX3 659 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 TNFSF13BQ9Y275 285 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 CYP46A1Q9Y6A2 500 aa6.21□□□□□ -1.42
SF3B1-210ENST00000482158 CCNT1O60563 726 aaKnown RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 NEURL1O76050 574 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 FCGR2AP12318 317 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 CERS1P27544 350 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 ABCD3P28288 659 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 ELF1P32519 619 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 DDIT3P35638 169 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 GGT5P36269 586 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 SLC12A2P55011 1212 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 DDX10Q13206 875 aaKnown RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 STIM1Q13586 685 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 NFIL3Q16649 462 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 SUPT20HL1Q3ZLR7 823 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 ACAD10Q6JQN1 1059 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 AADACL2Q6P093 401 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 NEK8Q86SG6 692 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 SCAIQ8N9R8 606 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 RFWD2Q8NHY2 731 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 ZUFSPQ96AP4 578 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 APOPT1Q96IL0 206 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 FAM118BQ9BPY3 351 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 LBHD1Q9BQE6 289 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 NPLQ9BXD5 320 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 CADM1Q9BY67 442 aaKnown RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 TTC12Q9H892 705 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 JMJD4Q9H9V9 463 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 PREBQ9HCU5 417 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 SLC25A10Q9UBX3 287 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 CNOT7Q9UIV1 285 aaKnown RBP6.2□□□□□ -1.42
SF3B1-210ENST00000482158 PNMA2Q9UL42 364 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 ARHGAP26Q9UNA1 814 aa6.2□□□□□ -1.42
SF3B1-210ENST00000482158 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms