RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ASNA1	O43681	348 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	CYP3A7	P24462	503 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	KLRC2	P26717	231 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	PDLIM4	P50479	330 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	ART1	P52961	327 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	ADPRH	P54922	357 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	POLE2	P56282	527 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	KRTAP10-12	P60413	245 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	ERVFC1-1	P60608	527 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	RBM6	P78332	1123 aa	Known RBP	3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	BTBD16	Q32M84	506 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	ALG10	Q5BKT4	473 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	ALG10B	Q5I7T1	473 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	SRL	Q86TD4	932 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM217A	Q8IXS0	508 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	SYTL1	Q8IYJ3	562 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	NRSN1	Q8IZ57	195 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	TMEM217	Q8N7C4	229 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	STYX	Q8WUJ0	223 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	ZNF556	Q9HAH1	456 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	CDC23	Q9UJX2	597 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	MAGED2	Q9UNF1	606 aa	Predicted RBP	3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	PCDHA10	Q9Y5I2	948 aa		3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	COPG1	Q9Y678	874 aa	Known RBP	3.58	□□□□□ -1.84
CCNL1-223	ENST00000481173	TCRBV7S3A2	A0A539	114 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	KCNJ18	B7U540	433 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	MCIDAS	D6RGH6	385 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	TNFRSF6B	O95407	300 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CGA	P01215	116 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	KLKB1	P03952	638 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	GYS1	P13807	737 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CHRNA5	P30532	468 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	SLC16A2	P36021	539 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	TMPRSS3	P57727	454 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	ZBTB16	Q05516	673 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CRYZ	Q08257	329 aa	Known RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	SF3A3	Q12874	501 aa	Known RBP eCLIP	3.57	□□□□□ -1.84	3e-23	■■□□□ 11.8
CCNL1-223	ENST00000481173	GPS2	Q13227	327 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	PICALM	Q13492	652 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	GPR18	Q14330	331 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	KRTAP24-1	Q3LI83	254 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	ERAP2	Q6P179	960 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	KIAA1324	Q6UXG2	1013 aa	Known RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	TMEM200A	Q86VY9	491 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CCDC25	Q86WR0	208 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	SLC25A41	Q8N5S1	370 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	ENGASE	Q8NFI3	743 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CMAS	Q8NFW8	434 aa	Predicted RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	OR1N1	Q8NGS0	311 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	GABPB2	Q8TAK5	448 aa	Predicted RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM110D	Q8TAY7	271 aa	Predicted RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	HMGB4	Q8WW32	186 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	TNIP3	Q96KP6	325 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	SGCZ	Q96LD1	299 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	TMEM120A	Q9BXJ8	343 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	DCLK3	Q9C098	648 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CDT1	Q9H211	546 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	PLAC1	Q9HBJ0	212 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	SEPSECS	Q9HD40	501 aa	Known RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	PNRC2	Q9NPJ4	139 aa	Known RBP	3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	ARL15	Q9NXU5	204 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	CNTN6	Q9UQ52	1028 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173	DTX4	Q9Y2E6	619 aa		3.57	□□□□□ -1.84
CCNL1-223	ENST00000481173		A0A1B0GUV1	79 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	OR6C75	A6NL08	312 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	SLC38A8	A6NNN8	435 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173		I6L893	689 aa	Predicted RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	RGS14	O43566	566 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	KRT18	P05783	430 aa	Known RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	LCK	P06239	509 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	TNFSF8	P32971	234 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	CLCN5	P51795	746 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	PMS2	P54278	862 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	ROR2	Q01974	943 aa	Known RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	HLTF	Q14527	1009 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	SHB	Q15464	509 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	SLC30A9	Q6PML9	568 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	ANKS1B	Q7Z6G8	1248 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	KLB	Q86Z14	1044 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	CADM3	Q8N126	398 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	DEPTOR	Q8TB45	409 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	WDR77	Q9BQA1	342 aa	Predicted RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	HDHD5	Q9BXW7	423 aa		3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	TP63	Q9H3D4	680 aa	Predicted RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	PLEKHB1	Q9UF11	243 aa	Predicted RBP	3.56	□□□□□ -1.84
CCNL1-223	ENST00000481173	TRBV5-7	A0A0A0MS05	114 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM90A18P	A6NE21	464 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	GAGE12J	A6NER3	117 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM90A16P	A6NEW6	464 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM90A9P	A6NNJ1	464 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	SMTNL1	A8MU46	457 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM90A5P	A8MXJ8	464 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	CAND2	O75155	1236 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	LCAT	P04180	440 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM90A15P	P0C7V4	464 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM90A14P	P0C7W9	464 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms