RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SIGLEC16A6NMB1 481 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 ATP9BO43861 1147 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 GJB6O95452 261 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 SERPINC1P01008 464 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 RHOCP08134 193 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 ENGP17813 658 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 ACSL1P33121 698 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 RFC1P35251 1148 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 NRG1Q02297 640 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 SFSWAPQ12872 951 aaKnown RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 ELAVL3Q14576 367 aaKnown RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 CST6Q15828 149 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 CDO1Q16878 200 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 ARL13BQ3SXY8 428 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 PPM1JQ5JR12 505 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 ARTNQ5T4W7 220 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 DCAF12L1Q5VU92 463 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 DAB2IPQ5VWQ8 1189 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 LUZP1Q86V48 1076 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 PTPRN2Q92932 1015 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 EDEM3Q9BZQ6 932 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 BTBD1Q9H0C5 482 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 SGK2Q9HBY8 427 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 PPARGC1AQ9UBK2 798 aaKnown RBP17.47■□□□□ 0.39
HSPG2-209ENST00000480900 DOCK9Q9BZ29 2069 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 SEMA4FO95754 770 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 TNFAIP3P21580 790 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 ADRA1BP35368 520 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 NUMBP49757 651 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 KRT83P78385 493 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 NR1I3Q14994 352 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 ASIC2Q16515 512 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 RAB6CQ53S08 254 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 C6orf118Q5T5N4 469 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 SH3PXD2AQ5TCZ1 1133 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 ACAD10Q6JQN1 1059 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 DNAJC24Q6P3W2 148 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 LRSAM1Q6UWE0 723 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 TFAP2DQ7Z6R9 452 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 STK40Q8N2I9 435 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 FRS2Q8WU20 508 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 FAM129BQ96TA1 746 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 PSMB7Q99436 277 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 C2orf49Q9BVC5 232 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-209ENST00000480900 TTYH3Q9C0H2 523 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 RAB6CQ9H0N0 254 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 AIPL1Q9NZN9 384 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 MPP6Q9NZW5 540 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 ZNF212Q9UDV6 495 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 NCKAP1Q9Y2A7 1128 aa17.46■□□□□ 0.39
HSPG2-209ENST00000480900 ACACBO00763 2458 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 A0A1B0GTW7 788 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 ANKRD62A6NC57 917 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 MID1O15344 667 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 SRGAP2O75044 1071 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 ADH1BP00325 375 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 SYPP08247 313 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 GPD1P21695 349 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 MAOBP27338 520 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 OR1E1P30953 314 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 HDAC4P56524 1084 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 FIGNQ5HY92 759 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 MANEALQ5VSG8 457 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 SFMBT2Q5VUG0 894 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 WDR59Q6PJI9 974 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 ZNF783Q6ZMS7 281 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 MMAAQ8IVH4 418 aaKnown RBP17.45■□□□□ 0.38
HSPG2-209ENST00000480900 MCOLN2Q8IZK6 566 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 SH2D3CQ8N5H7 860 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 DCAF4L2Q8NA75 395 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 GANCQ8TET4 914 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 FAM172AQ8WUF8 416 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 VCPIP1Q96JH7 1222 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 ZYG11BQ9C0D3 744 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 OSBPL2Q9H1P3 480 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 C6orf106Q9H6K1 298 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-209ENST00000480900 RETREG1Q9H6L5 497 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 FBXL12Q9NXK8 326 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 OR12D3Q9UGF7 316 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 ADAMTS1Q9UHI8 967 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 FZD4Q9ULV1 537 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 HS3ST2Q9Y278 367 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 PLXNA2O75051 1894 aa17.45■□□□□ 0.38
HSPG2-209ENST00000480900 TMEM131Q92545 1883 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 ILVBLA1L0T0 632 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 ARHGAP33O14559 1287 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 VAV1P15498 845 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 PRKCIP41743 596 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 MAPK8P45983 427 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 PSMD8P48556 350 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 ZNF143P52747 638 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-209ENST00000480900 ATXN3P54252 364 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-209ENST00000480900 FANCCQ00597 558 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 DLG2Q15700 870 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 SKOR2Q2VWA4 1001 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-209ENST00000480900 ZSCAN23Q3MJ62 389 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 PPP1R15BQ5SWA1 713 aa17.44■□□□□ 0.38
HSPG2-209ENST00000480900 E4F1Q66K89 784 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms