RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ARHGAP6O43182 974 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 HOXC11O43248 304 aaPredicted RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 BUB1O43683 1085 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 HYAL3O43820 417 aaPredicted RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 NRDCO43847 1150 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TBL1XO60907 577 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SRGAP2O75044 1071 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TULP3O75386 442 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 RNF8O76064 485 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 LATS1O95835 1130 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 ADH1CP00326 375 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 CAPNS1P04632 268 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 CYBBP04839 570 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 APODP05090 189 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TCF4P15884 667 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 GABRG2P18507 467 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TACR2P21452 398 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 ADRA1BP35368 520 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 GJC1P36383 396 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 GRIA2P42262 883 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TNFRSF4P43489 277 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 MAPK8P45983 427 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 VAV2P52735 878 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 NAP1L1P55209 391 aaKnown RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 KRT83P78385 493 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 GAD2Q05329 585 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SEMA3BQ13214 749 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 PIGHQ14442 188 aaPredicted RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 ARL13BQ3SXY8 428 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SLFN11Q7Z7L1 901 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 C14orf80Q86SX3 495 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 CIR1Q86X95 450 aaPredicted RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 SYT12Q8IV01 421 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SLC41A1Q8IVJ1 513 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 RHOT2Q8IXI1 618 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 PYROXD2Q8N2H3 581 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 DEFB119Q8N690 84 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 OR2I1PQ8NGU4 316 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 CCDC26Q8TAB7 109 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 RFFLQ8WZ73 363 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 AZIN2Q96A70 460 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TMA16Q96EY4 203 aaKnown RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 PRICKLE1Q96MT3 831 aaPredicted RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 PEBP4Q96S96 227 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 ACOX2Q99424 681 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 LACRTQ9GZZ8 138 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 ZWILCHQ9H900 591 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 TRIM10Q9UDY6 481 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 STOML2Q9UJZ1 356 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 KLK13Q9UKR3 277 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 VANGL2Q9ULK5 521 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 PAXBP1Q9Y5B6 917 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SMG1Q96Q15 3661 aaKnown RBP9.34□□□□□ -0.91
VCP-206ENST00000480327 NUMA1Q14980 2115 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 BPTFQ12830 3046 aa9.34□□□□□ -0.91
VCP-206ENST00000480327 SRRM3A6NNA2 597 aaPredicted RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 PRRT4C9JH25 899 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 F5H5T6 163 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 PRPSAP2O60256 369 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 LRCH4O75427 683 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 PROSCO94903 275 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 TNNT1P13805 278 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 TYRP14679 529 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 MIPP30301 263 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 WASP42768 502 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 NUMBP49757 651 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 IRAK1P51617 712 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 AUHQ13825 339 aaKnown RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 HSF5Q4G112 596 aaPredicted RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 MPPE1Q53F39 396 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 EOGTQ5NDL2 527 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 FYB2Q5VWT5 728 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 EGFLAMQ63HQ2 1017 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 FBXL22Q6P050 247 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 LPCAT2Q7L5N7 544 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 FAM217AQ8IXS0 508 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 CPXM2Q8N436 756 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 TERB1Q8NA31 727 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 FNIP1Q8TF40 1166 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 HSPH1Q92598 858 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 IGSF8Q969P0 613 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 ERLEC1Q96DZ1 483 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 RPRD1AQ96P16 312 aaPredicted RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 PRMT1Q99873 361 aaKnown RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 SLC6A17Q9H1V8 727 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 KCNF1Q9H3M0 494 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 GOLPH3Q9H4A6 298 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 CAPN10Q9HC96 672 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 DNAJC17Q9NVM6 304 aaKnown RBP9.33□□□□□ -0.92
VCP-206ENST00000480327 SALL4Q9UJQ4 1053 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 FZD10Q9ULW2 581 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 CLEC4EQ9ULY5 219 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 HYOU1Q9Y4L1 999 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
VCP-206ENST00000480327 FASNP49327 2511 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms