RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 BBOF1Q8ND07 529 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 CCNYQ8ND76 341 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
SIK3-209ENST00000480222 DDI1Q8WTU0 396 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 CELF6Q96J87 481 aaKnown RBP12.89□□□□□ -0.35
SIK3-209ENST00000480222 SPATA13Q96N96 652 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 LGMNQ99538 433 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 SLC39A8Q9C0K1 460 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 POMKQ9H5K3 350 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 NOL6Q9H6R4 1146 aaKnown RBP12.89□□□□□ -0.35
SIK3-209ENST00000480222 ZFP14Q9HCL3 533 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 GDF3Q9NR23 364 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 FAM114A2Q9NRY5 505 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 NDFIP2Q9NV92 336 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 THG1LQ9NWX6 298 aaKnown RBP12.89□□□□□ -0.35
SIK3-209ENST00000480222 PAK5Q9P286 719 aa12.89□□□□□ -0.35
SIK3-209ENST00000480222 DMGDHQ9UI17 866 aaKnown RBP12.89□□□□□ -0.35
SIK3-209ENST00000480222 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
SIK3-209ENST00000480222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 C5orf60A6NFR6 353 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 H0Y626 953 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 NFATC1O95644 943 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 ADH1CP00326 375 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 LAMP2P13473 410 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 FOSL2P15408 326 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 PAPOLAP51003 745 aaKnown RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 GDF10P55107 478 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 SERINC3Q13530 473 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 PDGFRLQ15198 375 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 FYB2Q5VWT5 728 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 DUPD1Q68J44 220 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 CXorf57Q6NSI4 855 aaKnown RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 MYLIPQ8WY64 445 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.88□□□□□ -0.35
SIK3-209ENST00000480222 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 IRF7Q92985 503 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 ELSPBP1Q96BH3 223 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 LRRC45Q96CN5 670 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 HMCESQ96FZ2 354 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 SNF8Q96H20 258 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 ZNF599Q96NL3 588 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 MYADMQ96S97 322 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 PNKPQ96T60 521 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 UBE2ZQ9H832 354 aaPredicted RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 SP110Q9HB58 689 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 HAUS2Q9NVX0 235 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 DUS2Q9NX74 493 aaKnown RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 WHRNQ9P202 907 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 EPS15L1Q9UBC2 864 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
SIK3-209ENST00000480222 RAB21Q9UL25 225 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 COL4A3Q01955 1670 aa12.88□□□□□ -0.35
SIK3-209ENST00000480222 CXorf51AA0A1B0GTR3 108 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
SIK3-209ENST00000480222 HEPACAM2A8MVW5 462 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 SMAPO00193 183 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 RNF103O00237 685 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
SIK3-209ENST00000480222 MAFKO60675 156 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 ECI2O75521 394 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 GCATO75600 419 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 VIPR2P41587 438 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 CLCN6P51797 869 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 MRPS25P82663 173 aaKnown RBP12.87□□□□□ -0.35
SIK3-209ENST00000480222 IL10RBQ08334 325 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 CALCOCO2Q13137 446 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 SLC12A1Q13621 1099 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 EML3Q32P44 896 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 ITPRIPL1Q6GPH6 555 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 PCGF5Q86SE9 256 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 TP53INP2Q8IXH6 220 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 DCAF4L2Q8NA75 395 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 MAML1Q92585 1016 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 RSPRY1Q96DX4 576 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 PPP1R2P1Q96PQ5 205 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 MUC3AQ02505 3323 aa12.87□□□□□ -0.35
SIK3-209ENST00000480222 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
SIK3-209ENST00000480222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
SIK3-209ENST00000480222 MATN3O15232 486 aa12.86□□□□□ -0.35
SIK3-209ENST00000480222 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
SIK3-209ENST00000480222 SEC31AO94979 1220 aaKnown RBP12.86□□□□□ -0.35
SIK3-209ENST00000480222 CYP17A1P05093 508 aa12.86□□□□□ -0.35
SIK3-209ENST00000480222 PTPN3P26045 913 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms