RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GKN1Q9NS71 199 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 FAM49BQ9NUQ9 324 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 DUS2Q9NX74 493 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 LSM7Q9UK45 103 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 MAGED2Q9UNF1 606 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CCL26Q9Y258 94 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SIK3Q9Y2K2 1263 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 PAXBP1Q9Y5B6 917 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CAPN6Q9Y6Q1 641 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 TSC2P49815 1807 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 PDCD11Q14690 1871 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 VWA8A3KMH1 1905 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 ATG2AQ2TAZ0 1938 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CITO14578 2027 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 A0A1W2PQJ5 194 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 BECN2A8MW95 431 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 F8VZ95 297 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 HSF2BPO75031 334 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 LRRN2O75325 713 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 STC2O76061 302 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ENDOD1O94919 500 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 RNASE1P07998 156 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 RARGP13631 454 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 HNRNPLP14866 589 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 CYP11B1P15538 503 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 GJA1P17302 382 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SLC9A1P19634 815 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SP100P23497 879 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 GJA4P35212 333 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 DPP6P42658 865 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 HARS2P49590 506 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF165P49910 485 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 TKTL1P51854 596 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 VCPP55072 806 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 STX17P56962 302 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 YWHAGP61981 247 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 YWHAZP63104 245 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 CDR2Q01850 454 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 NHLH1Q02575 133 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 PDCLQ13371 301 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ENPP2Q13822 863 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 KRT31Q15323 416 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ANGPT1Q15389 498 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 DHCR24Q15392 516 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 GAB4Q2WGN9 574 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 TMEM201Q5SNT2 666 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ADGRF1Q5T601 910 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF318Q5VUA4 2279 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SDHAF4Q5VUM1 108 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 BSPRYQ5W0U4 402 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ISM2Q6H9L7 571 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 PMF1Q6P1K2 205 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 RHBDF2Q6PJF5 856 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 WDFY4Q6ZS81 3184 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 TOGARAM2Q6ZUX3 1019 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 GPRIN1Q7Z2K8 1008 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 REC114Q7Z4M0 266 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 KIAA0907Q7Z7F0 614 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 DRC7Q8IY82 874 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 MAML2Q8IZL2 1156 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SIX6OS1Q8N1H7 587 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 TMEM35BQ8NCS4 154 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 MSANTD4Q8NCY6 345 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 PRSS33Q8NF86 280 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 DDX1Q92499 740 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 GOLGA1Q92805 767 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 CD101Q93033 1021 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 LOXL4Q96JB6 756 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 VCPIP1Q96JH7 1222 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SLC2A13Q96QE2 648 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 XPO6Q96QU8 1125 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 PNKPQ96T60 521 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 P2RY13Q9BPV8 354 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 DDX50Q9BQ39 737 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 EPC1Q9H2F5 836 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 SAMSN1Q9NSI8 373 aaKnown RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 OSER1Q9NX31 292 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ZSCAN32Q9NX65 697 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 MARCH2Q9P0N8 246 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 GMIPQ9P107 970 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 CHORDC1Q9UHD1 332 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 MYO15AQ9UKN7 3530 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ADAMTS6Q9UKP5 1117 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 POLR3KQ9Y2Y1 108 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-213ENST00000480102 CEP83Q9Y592 693 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 PCDHB4Q9Y5E5 795 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 CPQQ9Y646 472 aa5.1□□□□□ -1.59
PTCD3-213ENST00000480102 ITIH6Q6UXX5 1313 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 A0A1W2PQH9 124 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 OTOL1A6NHN0 477 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 EIF3CLB5ME19 914 aaKnown RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 FOXN3O00409 490 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 PAPSS1O43252 624 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 LAMTOR5O43504 91 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 PI15O43692 258 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 GFPT2O94808 682 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 F9P00740 461 aa5.09□□□□□ -1.59
PTCD3-213ENST00000480102 PDGFBP01127 241 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-213ENST00000480102 LTFP02788 710 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms