RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 FDFT1P37268 417 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 ETFBP38117 255 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 MAGEA6P43360 314 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 RPS24P62847 133 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 IFI35P80217 286 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 BASP1P80723 227 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 WASHC5Q12768 1159 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 USP4Q13107 963 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 ZNF177Q13360 481 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 ADAM15Q13444 863 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 ZNF77Q15935 545 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 KCTD19Q17RG1 926 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 MPPE1Q53F39 396 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 ITPRIPL1Q6GPH6 555 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 CIR1Q86X95 450 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 BBS7Q8IWZ6 715 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 MREGQ8N565 214 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 TDRD5Q8NAT2 981 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 NUP205Q92621 2012 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 EXOC4Q96A65 974 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 OTUB2Q96DC9 234 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 TMA16Q96EY4 203 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 RAB6BQ9NRW1 208 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 SEPT10Q9P0V9 454 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 KLHL8Q9P2G9 620 aaPredicted RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 IGSF9Q9P2J2 1179 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 TBC1D14Q9P2M4 693 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 IPO11Q9UI26 975 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 TBC1D30Q9Y2I9 924 aa12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 RANBP2P49792 3224 aaKnown RBP12.24□□□□□ -0.45
TM9SF4-206ENST00000479591 NYNRINQ9P2P1 1898 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 KCNK1O00180 336 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TRDMT1O14717 391 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SLC9A3R1O14745 358 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TP73O15350 636 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 LINC01565O15544 149 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TBL1XO60907 577 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 RHOCP08134 193 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 POU3F3P20264 500 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TNNT3P45378 269 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 NRLP54845 237 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 GNA12Q03113 381 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 IL10RBQ08334 325 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SERINC3Q13530 473 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SEMA5AQ13591 1074 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 PARP6Q2NL67 630 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TEX44Q53QW1 395 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SPDYCQ5MJ68 293 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SYCE2Q6PIF2 218 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 PPP1R21Q6ZMI0 780 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 PID1Q7Z2X4 250 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 HDXQ7Z353 690 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 CCDC117Q8IWD4 279 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ZNF567Q8N184 647 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ZCCHC9Q8N567 271 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 CELF5Q8N6W0 485 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 NAT8LQ8N9F0 302 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ITFG1Q8TB96 612 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ZSCAN18Q8TBC5 510 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 DEPDC1BQ8WUY9 529 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 NSMCE1Q8WV22 266 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ING5Q8WYH8 240 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 CPT1BQ92523 772 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 MAML1Q92585 1016 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ARHGEF2Q92974 986 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 HMCESQ96FZ2 354 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TEKT5Q96M29 485 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 ZSWIM3Q96MP5 696 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 PPP1R2P1Q96PQ5 205 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 IL12RB2Q99665 862 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 FRMD8Q9BZ67 464 aaPredicted RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SMG9Q9H0W8 520 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SP110Q9HB58 689 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 GDE1Q9NZC3 331 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 CCL26Q9Y258 94 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 SHROOM3Q8TF72 1996 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 TRANK1O15050 2925 aa12.23□□□□□ -0.45
TM9SF4-206ENST00000479591 H0Y626 953 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 PRAMEF12O95522 483 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 JCHAINP01591 159 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 FAM153BP0C7A2 387 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 CCNB1P14635 433 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 TPSB2P20231 275 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 HSPA9P38646 679 aaKnown RBP12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 RENBPP51606 427 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 SGSHP51688 502 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 OXCT1P55809 520 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 CDK16Q00536 496 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 HNRNPDQ14103 355 aaKnown RBP12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 KCNJ11Q14654 390 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 TPSAB1Q15661 275 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 FAM153CQ494X1 144 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 ATAT1Q5SQI0 421 aa12.22□□□□□ -0.45
TM9SF4-206ENST00000479591 RNF43Q68DV7 783 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms