RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 HNF1BP35680 557 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ARL3P36405 182 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 PLA2G5P39877 138 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 RGS2P41220 211 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 RPS6KA3P51812 740 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ELLP55199 621 aaPredicted RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 WDR5P61964 334 aaKnown RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 ARHGAP8P85298 464 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 CFHR3Q02985 330 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 GAB1Q13480 694 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 MAMLD1Q13495 774 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 DCTN2Q13561 401 aaKnown RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 RNASE12Q5GAN4 147 aaKnown RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 SH2D4BQ5SQS7 431 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 UBAP2Q5T6F2 1119 aaKnown RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 KAZNQ674X7 775 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ANKRD16Q6P6B7 361 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 PXKQ7Z7A4 578 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 GALNT5Q7Z7M9 940 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 MON1AQ86VX9 555 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 SCN4BQ8IWT1 228 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 LAS2Q8IYD9 372 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ADSSL1Q8N142 457 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ADPRHL1Q8NDY3 354 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 TNIP2Q8NFZ5 429 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 SCARB1Q8WTV0 552 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 SMG7Q92540 1137 aaKnown RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 KIF1BPQ96EK5 621 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 NR1H4Q96RI1 486 aaPredicted RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 EYA3Q99504 573 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 CLSTN3Q9BQT9 956 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 THAP7Q9BT49 309 aaPredicted RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.93□□□□□ -1.78
NF1-209ENST00000479536 HDHD5Q9BXW7 423 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ITPAQ9BY32 194 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 RNF26Q9BY78 433 aaPredicted RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 TRIM31Q9BZY9 425 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 CCDC68Q9H2F9 335 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 BRF2Q9HAW0 419 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 EIF2B3Q9NR50 452 aaKnown RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 DIAPH3Q9NSV4 1193 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 ANKEF1Q9NU02 776 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 SYBUQ9NX95 663 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 HCN3Q9P1Z3 774 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 TBC1D29Q9UFV1 150 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 VPS28Q9UK41 221 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 SARDHQ9UL12 918 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 OSGIN2Q9Y236 505 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 B3GNT3Q9Y2A9 372 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 PSAT1Q9Y617 370 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 EPN1Q9Y6I3 576 aaPredicted RBP3.93□□□□□ -1.78
NF1-209ENST00000479536 KDM3AQ9Y4C1 1321 aa3.93□□□□□ -1.78
NF1-209ENST00000479536 NPIPB15A6NHN6 443 aaPredicted RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 TTC34A8MYJ7 566 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 TMEM232C9JQI7 657 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 AP3D1O14617 1153 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 IKBKBO14920 756 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 SYN3O14994 580 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 FYB1O15117 783 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 MLYCDO95822 493 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 TTLL1O95922 423 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 URODP06132 367 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 EBLN1P0CF75 366 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 LAMP2P13473 410 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 CYP4B1P13584 511 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 SFPQP23246 707 aaKnown RBP eCLIP3.92□□□□□ -1.78
NF1-209ENST00000479536 NDUFS1P28331 727 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 MLH1P40692 756 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 STAT6P42226 847 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 COPB1P53618 953 aaKnown RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 SLC37A1P57057 533 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 EEFSECP57772 596 aaKnown RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 RPS3AP61247 264 aaKnown RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 UFM1P61960 85 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 BLOC1S1P78537 153 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 SHC2P98077 582 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 B4GALNT1Q00973 533 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 BYSLQ13895 437 aaKnown RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 CNGA3Q16281 694 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 MTFR2Q6P444 385 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 Q6ZNX1 250 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 ENOSF1Q7L5Y1 443 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 ADGRF3Q8IZF5 1079 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 VPS52Q8N1B4 723 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 LINC01465Q8N7H1 131 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 ETNPPLQ8TBG4 499 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 KAZALD1Q96I82 304 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 C5orf34Q96MH7 638 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 MMS19Q96T76 1030 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 LBHD1Q9BQE6 289 aaPredicted RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 ADGRE3Q9BY15 652 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 SLC29A3Q9BZD2 475 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 RANBP17Q9H2T7 1088 aaKnown RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 SFXN1Q9H9B4 322 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 KCND2Q9NZV8 630 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 SEMA5BQ9P283 1151 aa3.92□□□□□ -1.78
NF1-209ENST00000479536 RSF1Q96T23 1441 aaPredicted RBP3.92□□□□□ -1.78
NF1-209ENST00000479536 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 GTPBP1O00178 669 aaKnown RBP3.91□□□□□ -1.78
NF1-209ENST00000479536 PRYO14603 147 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms