RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZDHHC17Q8IUH5 632 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 C1orf131Q8NDD1 294 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ATXN2LQ8WWM7 1075 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 KCTD13Q8WZ19 329 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF707Q96C28 371 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 PPP1R13BQ96KQ4 1090 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 CDK5RAP1Q96SZ6 601 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 TTLL2Q9BWV7 592 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 NACA2Q9H009 215 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 S1PR5Q9H228 398 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 SLITRK6Q9H5Y7 841 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 HAUS4Q9H6D7 363 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 WDR6Q9NNW5 1121 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 LUC7LQ9NQ29 371 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 CNGB3Q9NQW8 809 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 TLR8Q9NR97 1041 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ABHD10Q9NUJ1 306 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 DNMT3BQ9UBC3 853 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 SH3BP1Q9Y3L3 701 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 USP15Q9Y4E8 981 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ZFP37Q9Y6Q3 630 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF638Q14966 1978 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 CHD9Q3L8U1 2897 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 A0A087WUV0 522 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TRAV19A0A0A6YYK7 116 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CCP110O43303 1012 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 BEST1O76090 585 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 IPO7O95373 1038 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ZBED1O96006 694 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CALCAP01258 141 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CALB1P05937 261 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TUBBP07437 444 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 LCP1P13796 627 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TNNT1P13805 278 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 HNRNPH3P31942 346 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CDH5P33151 784 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 GPD2P43304 727 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 RGS7P49802 495 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 KIF11P52732 1056 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CACNA2D1P54289 1103 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 EPHA5P54756 1037 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ADKP55263 362 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 FMO1Q01740 532 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 GOLGA8FQ08AF8 430 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 GOLGA8DPQ0D2H9 430 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ADIGQ0VDE8 80 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TAF10Q12962 218 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TBX2Q13207 712 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 PDCLQ13371 301 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 C2orf27AQ580R0 203 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 RAB41Q5JT25 222 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 NAA35Q5VZE5 725 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 BTBD8Q5XKL5 378 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 LETMD1Q6P1Q0 360 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 FBXO38Q6PIJ6 1188 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TOGARAM2Q6ZUX3 1019 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 RSRC2Q7L4I2 434 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CCDC186Q7Z3E2 898 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 IRF2BP2Q7Z5L9 587 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 MON1AQ86VX9 555 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ERICH1Q86X53 443 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 SCML4Q8N228 414 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 TDRD5Q8NAT2 981 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 SPC24Q8NBT2 197 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ZMIZ2Q8NF64 920 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 RNF139Q8WU17 664 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 SLC20A1Q8WUM9 679 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 SLC35F5Q8WV83 523 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 IRGQQ8WZA9 623 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 DDX1Q92499 740 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 EZH1Q92800 747 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 C18orf8Q96DM3 657 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CCDC42Q96M95 316 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 PANX2Q96RD6 677 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 PHF7Q9BWX1 381 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 ACP6Q9NPH0 428 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 OLA1Q9NTK5 396 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 HCFC1R1Q9NWW0 138 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 WDR35Q9P2L0 1181 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 NOCTQ9UK39 431 aaKnown RBP6.44□□□□□ -1.38
SF3B1-209ENST00000479532 SCML2Q9UQR0 700 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 SLC5A6Q9Y289 635 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 DENND4AQ7Z401 1863 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 CHD7Q9P2D1 2997 aa6.44□□□□□ -1.38
SF3B1-209ENST00000479532 OBSL1O75147 1896 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 DENND4CQ5VZ89 1909 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 SSU72P8A0A1W2PR75 194 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ERICH4A6NGS2 130 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 HHLA1C9JL84 531 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 E5RJQ4 531 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CAPN9O14815 690 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 AKR1B10O60218 316 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 RTN2O75298 545 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms