RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 NOMO1Q15155 1222 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 KCNA10Q16322 511 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 PPM1LQ5SGD2 360 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 ARMC12Q5T9G4 340 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 BRI3BPQ8WY22 251 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 OLFM3Q96PB7 478 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 TM6SF2Q9BZW4 377 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 MPP6Q9NZW5 540 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 TCRBV9S1A1TA0A576 114 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 RASSF10A6NK89 507 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 ALADP13716 330 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 KCNA3P22001 575 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 FECHP22830 423 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 USP41Q3LFD5 358 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 DEFB107AQ8IZN7 70 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 CATSPER2Q96P56 530 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 CSPG4P5Q96PW8 444 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 ACOX2Q99424 681 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 TEX12Q9BXU0 123 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.46□□□□□ -0.09
NPHP4-208ENST00000478423 ADGRA3Q8IWK6 1321 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 NR5A2O00482 541 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 DCXO43602 365 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 ARIH2O95376 493 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 IGSF6O95976 241 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 OR4Q2P0C623 313 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 SLC24A5Q71RS6 500 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 CYGBQ8WWM9 190 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 OXNAD1Q96HP4 312 aaPredicted RBP14.46□□□□□ -0.1
NPHP4-208ENST00000478423 TMEM237Q96Q45 408 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 ELOVL6Q9H5J4 265 aa14.46□□□□□ -0.1
NPHP4-208ENST00000478423 RNASEH1O60930 286 aaKnown RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 FKTNO75072 461 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 BAIAP3O94812 1187 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 BOP1Q14137 746 aaKnown RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 SLC26A9Q7LBE3 791 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 ZNF467Q7Z7K2 595 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 C11orf96Q7Z7L8 435 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 DENND1CQ8IV53 801 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 TXNRD2Q9NNW7 524 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.45□□□□□ -0.14e-6■□□□□ 8.5
NPHP4-208ENST00000478423 RAD54BQ9Y620 910 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 KPNA3O00505 521 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 PIGNO95427 931 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 CYP1A1P04798 512 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 PIRTP0C851 137 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 ATP6V1E1P36543 226 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 HALP42357 657 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 CDKN2BP42772 138 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 SMAD3P84022 425 aaKnown RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 DUSP4Q13115 394 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 TEKT4Q8WW24 435 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 EXOC2Q96KP1 924 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 TMEM161AQ9NX61 479 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 CHCHD3Q9NX63 227 aaKnown RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 RGPD2P0DJD1 1756 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 TMEM88BA6NKF7 163 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 CDH2P19022 906 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 SOAT1P35610 550 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 NFYCQ13952 458 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 PSMD5Q16401 504 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 PLD5Q8N7P1 536 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 CENPTQ96BT3 561 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 FMO4P31512 558 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 ASTE1Q2TB18 679 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 TMPRSS6Q8IU80 811 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 LRRC49Q8IUZ0 686 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 NKD2Q969F2 451 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-208ENST00000478423 MID1IP1Q9NPA3 183 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 SLCO1B3Q9NPD5 702 aa14.45□□□□□ -0.1
NPHP4-208ENST00000478423 BTN3A1O00481 513 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 CLCNKBP51801 687 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 XRCC4Q13426 336 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 TAF5Q15542 800 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 TTC27Q6P3X3 843 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 KYQ8NBH2 561 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 LRRC4CQ9HCJ2 640 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 PTPRHQ9HD43 1115 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 STXBP5LQ9Y2K9 1186 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 MSI1O43347 362 aaKnown RBP14.44□□□□□ -0.1
NPHP4-208ENST00000478423 CCNT2O60583 730 aaKnown RBP14.44□□□□□ -0.1
NPHP4-208ENST00000478423 XYLBO75191 536 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 KATNA1O75449 491 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 HOXB8P17481 243 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-208ENST00000478423 ATP6AP1LQ52LC2 224 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 TMEM192Q8IY95 271 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 PIWIL2Q8TC59 973 aaKnown RBP14.44□□□□□ -0.1
NPHP4-208ENST00000478423 ZNF516Q92618 1163 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 OTUB1Q96FW1 271 aaPredicted RBP14.44□□□□□ -0.1
NPHP4-208ENST00000478423 CACUL1Q86Y37 369 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 METTL6Q8TCB7 284 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 SPPL2BQ8TCT7 592 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 C7orf43Q8WVR3 580 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 OSGEPL1Q9H4B0 414 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 NMRK1Q9NWW6 199 aa14.44□□□□□ -0.1
NPHP4-208ENST00000478423 OR6C75A6NL08 312 aa14.43□□□□□ -0.1
NPHP4-208ENST00000478423 SEPT4O43236 478 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms