RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TRIM69Q86WT6 500 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 OR14C36Q8NHC7 312 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 OR8D1Q8WZ84 308 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 SERAC1Q96JX3 654 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
ABCF3-212ENST00000478288 SRRTQ9BXP5 876 aaKnown RBP13.38□□□□□ -0.27
ABCF3-212ENST00000478288 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 AASDHPPTQ9NRN7 309 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 APEX2Q9UBZ4 518 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 DMTF1Q9Y222 760 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
ABCF3-212ENST00000478288 CFAP46Q8IYW2 2715 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 BECN2A8MW95 431 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 TLR4O00206 839 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 PLRG1O43660 514 aaKnown RBP13.37□□□□□ -0.27
ABCF3-212ENST00000478288 MAGEC1O60732 1142 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 RFPL3O75679 317 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 ITGAVP06756 1048 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 PDGFRAP16234 1089 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 HNF1BP35680 557 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 SNX16P57768 344 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
ABCF3-212ENST00000478288 ILKQ13418 452 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 TAF5Q15542 800 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 COL28A1Q2UY09 1125 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 C5orf22Q49AR2 442 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 FBXL22Q6P050 247 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 DHRS13Q6UX07 377 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 SHC3Q92529 594 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 TSC1Q92574 1164 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 NXPE2Q96DL1 559 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 ALG14Q96F25 216 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 PPP1R13BQ96KQ4 1090 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 NOX5Q96PH1 765 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 CPXM1Q96SM3 734 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 FEM1AQ9BSK4 669 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 RRN3Q9NYV6 651 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 ARHGAP20Q9P2F6 1191 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 RWDD2AQ9UIY3 292 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 SLC25A13Q9UJS0 675 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 MGAQ8IWI9 3026 aa13.37□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3DA0A087WVF3 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3IA0A087WXS9 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3EA0A087X179 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3KA0A087X1G2 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3FA6NER0 549 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3LB9A6J9 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 C1QTNF3-AMACRE9PGA6 284 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 BIN1O00499 593 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 WNT9AO14904 365 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 MCF2LO15068 1137 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 CLDN11O75508 207 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 LDOC1O95751 146 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3HP0C7X1 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 ACADVLP49748 655 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 STX17P56962 302 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 PPP2CBP62714 309 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 PPP2CAP67775 309 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 AUHQ13825 339 aaKnown RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 AGBL4Q5VU57 503 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3GQ6DHY5 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3CQ6IPX1 549 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 C11orf57Q6ZUT1 292 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 SLC26A9Q7LBE3 791 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 CIR1Q86X95 450 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 GATAD2AQ86YP4 633 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D3Q8IZP1 549 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 CACTIN-AS1Q8N1I8 211 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 WDTC1Q8N5D0 677 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 CNDP2Q96KP4 475 aaKnown RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 PREBQ9HCU5 417 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 ACP6Q9NPH0 428 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 PPM1HQ9ULR3 514 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 HS3ST2Q9Y278 367 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TBC1D30Q9Y2I9 924 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 OR51B4Q9Y5P0 310 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 TDRD6O60522 2096 aaKnown RBP13.36□□□□□ -0.27
ABCF3-212ENST00000478288 CHD5Q8TDI0 1954 aa13.36□□□□□ -0.27
ABCF3-212ENST00000478288 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.35□□□□□ -0.27
ABCF3-212ENST00000478288 FAM149AA5PLN7 773 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 RNGTTO60942 597 aaKnown RBP13.35□□□□□ -0.27
ABCF3-212ENST00000478288 DAB1O75553 588 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 VAV1P15498 845 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 NOS2P35228 1153 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 CENPCQ03188 943 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 CYP4F3Q08477 520 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 ZNF177Q13360 481 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms