RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 GTPBP4Q9BZE4 634 aaKnown RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 SCAND2PQ9GZW5 306 aaPredicted RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 MIS12Q9H081 205 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 METTL14Q9HCE5 456 aaKnown RBP9.96□□□□□ -0.82
CCM2-210ENST00000478169 CFAP46Q8IYW2 2715 aa9.96□□□□□ -0.82
CCM2-210ENST00000478169 ZNF462Q96JM2 2506 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 F5H5T6 163 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 PRAMEF26H0Y7S4 382 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 ALOX15BO15296 676 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 RNGTTO60942 597 aaKnown RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 ZIC2O95409 532 aaPredicted RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 MOCS2O96007 188 aaPredicted RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 BRD2P25440 801 aaKnown RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 GPD2P43304 727 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 STK19P49842 368 aaPredicted RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 INSM1Q01101 510 aaPredicted RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 TLE3Q04726 772 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 CETN1Q12798 172 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 SETMARQ53H47 684 aaPredicted RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 ZC3H12AQ5D1E8 599 aaKnown RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 TTC39BQ5VTQ0 682 aaPredicted RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 SYPL2Q5VXT5 272 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 RAP1GAP2Q684P5 730 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 ZNF605Q86T29 641 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 TAC4Q86UU9 113 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 CHSY1Q86X52 802 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 PPM1KQ8N3J5 372 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 ATP6V0D2Q8N8Y2 350 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 STK32AQ8WU08 396 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 OR8D1Q8WZ84 308 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 KLHDC7BQ96G42 594 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 GOLPH3LQ9H4A5 285 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 POPDC2Q9HBU9 364 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.95□□□□□ -0.827e-6■□□□□ 10.1
CCM2-210ENST00000478169 SLC12A6Q9UHW9 1150 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 XPO7Q9UIA9 1087 aaKnown RBP9.95□□□□□ -0.82
CCM2-210ENST00000478169 ATP6V1DQ9Y5K8 247 aa9.95□□□□□ -0.82
CCM2-210ENST00000478169 A0A1B0GVM2 712 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 TCAF2A6NFQ2 919 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 KCNU1A8MYU2 1149 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 C1QTNF3-AMACRE9PGA6 284 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 TRIM38O00635 465 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 MCF2LO15068 1137 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 P4HA2O15460 535 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 SIGLEC6O43699 453 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ATP9BO43861 1147 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 RTN2O75298 545 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 TRUB2O95900 331 aaKnown RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 MT-CO3P00414 261 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 IGLV3-25P01717 112 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 SLC2A3P11169 496 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 PLA2G2AP14555 144 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 VAV1P15498 845 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 PDGFRAP16234 1089 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 MAT2AP31153 395 aaKnown RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 PMS1P54277 932 aaKnown RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 YWHAZP63104 245 aaKnown RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 DAB2P98082 770 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 GCNT1Q02742 428 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 PNOCQ13519 176 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 EIF4EBP2Q13542 120 aaPredicted RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 MEA1Q16626 185 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 HS1BP3Q53T59 392 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 RABGAP1LQ5R372 815 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 AGBL4Q5VU57 503 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 NEK5Q6P3R8 708 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ERICH1Q86X53 443 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 SPACA3Q8IXA5 215 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 LSMEM2Q8N112 164 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 CCAR2Q8N163 923 aaKnown RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 SLC25A45Q8N413 288 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ZNF843Q8N446 348 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ZNF248Q8NDW4 579 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 LMO3Q8TAP4 145 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 WBP1Q96G27 269 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ZNF578Q96N58 590 aaPredicted RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 MED15Q96RN5 788 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 PRMT1Q99873 361 aaKnown RBP9.94□□□□□ -0.82
CCM2-210ENST00000478169 SLC4A5Q9BY07 1137 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 PREBQ9HCU5 417 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ST7Q9NRC1 585 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 SLC25A13Q9UJS0 675 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 SARDHQ9UL12 918 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 PPM1HQ9ULR3 514 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 CNTN6Q9UQ52 1028 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ZDHHC9Q9Y397 364 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 RP1P56715 2156 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 DOCK4Q8N1I0 1966 aa9.94□□□□□ -0.82
CCM2-210ENST00000478169 ATMQ13315 3056 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 TRIM49BA6NDI0 452 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 SDC3O75056 442 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 DGKAP23743 735 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 METAP1P53582 386 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 UCNP55089 124 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 CXADRP78310 365 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 CCDC15Q0P6D6 951 aa9.93□□□□□ -0.82
CCM2-210ENST00000478169 CCDC173Q0VFZ6 552 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms