RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SRRM1Q8IYB3 904 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 NPWQ8N729 165 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 ACMSDQ8TDX5 336 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 DCAKDQ8WVC6 231 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 CKAP2Q8WWK9 683 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SPOCK2Q92563 424 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 DPF3Q92784 378 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 MAGEB18Q96M61 343 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 PGLYRP2Q96PD5 576 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SIK2Q9H0K1 926 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 KCNK9Q9NPC2 374 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 CASS4Q9NQ75 786 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
VMA21-203ENST00000477649 VPS45Q9NRW7 570 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 MOCS1Q9NZB8 636 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 TRPM5Q9NZQ8 1165 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SEPT10Q9P0V9 454 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 SFMBT1Q9UHJ3 866 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 NEU3Q9UQ49 428 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 HS3ST4Q9Y661 456 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 MAD1L1Q9Y6D9 718 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 CDY1Q9Y6F8 540 aa8.12□□□□□ -1.11
VMA21-203ENST00000477649 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 GOLGA6L7A0A1B0GV03 622 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 FAM237BA0A1B0GVD1 139 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 SLC12A8A0AV02 714 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 WDR27A2RRH5 827 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ERICH4A6NGS2 130 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 TLR5O60602 858 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MAFKO60675 156 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 USP1O94782 785 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MAP3K6O95382 1288 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 RAG1P15918 1043 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 PSMB4P28070 264 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 OR1D2P34982 312 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 HARS2P49590 506 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 RABGGTBP53611 331 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 SLC18A2Q05940 514 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 EFEMP1Q12805 493 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 CDH17Q12864 832 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MPP3Q13368 585 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ITIH4Q14624 930 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 SLC14A2Q15849 920 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 TAF12Q16514 161 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 TCTN1Q2MV58 587 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 KBTBD12Q3ZCT8 623 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MS4A13Q5J8X5 152 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 RABGAP1LQ5R372 815 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 STXBP5Q5T5C0 1151 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 UBAP2Q5T6F2 1119 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 FAXCQ5TGI0 409 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.118e-7■□□□□ 9.2
VMA21-203ENST00000477649 UNC5AQ6ZN44 842 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZNF534Q76KX8 674 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MARK2Q7KZI7 788 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 ARHGAP12Q8IWW6 846 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 TCEAL8Q8IYN2 117 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZNF683Q8IZ20 524 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 CACNA2D3Q8IZS8 1091 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 CYP4X1Q8N118 509 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 BBS5Q8N3I7 341 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZNF473Q8WTR7 871 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZBTB9Q96C00 473 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZNF599Q96NL3 588 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZNF317Q96PQ6 595 aaPredicted RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 WDR83Q9BRX9 315 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 MAGEB5Q9BZ81 275 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 NACA2Q9H009 215 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 VPS11Q9H270 941 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MRM3Q9HC36 420 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 ENTPD7Q9NQZ7 604 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MRPL17Q9NRX2 175 aaKnown RBP8.11□□□□□ -1.11
VMA21-203ENST00000477649 OSER1Q9NX31 292 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 TBK1Q9UHD2 729 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 VANGL2Q9ULK5 521 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 SLC27A5Q9Y2P5 690 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 MFHAS1Q9Y4C4 1052 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 TTLL3Q9Y4R7 772 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 PCDHB12Q9Y5F1 795 aa8.11□□□□□ -1.11
VMA21-203ENST00000477649 ZNF840PA6NDX5 716 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 NT5C1B-RDH14C9J2C7 533 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 F5H5T6 163 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 KCNK1O00180 336 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 DFFAO00273 331 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 ZBTB24O43167 697 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 MSI1O43347 362 aaKnown RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 TYROBPO43914 113 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 RAMP2O60895 175 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 UPP2O95045 317 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 VNN2O95498 520 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 JCHAINP01591 159 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 ALADP13716 330 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 KRT4P19013 534 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 DRD4P21917 467 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms