RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RPRD1AQ96P16 312 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-236ENST00000477477 NOX5Q96PH1 765 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 GDF3Q9NR23 364 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 DKK4Q9UBT3 224 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 AJAP1Q9UKB5 411 aaPredicted RBP11.7□□□□□ -0.54
HDLBP-236ENST00000477477 VANGL2Q9ULK5 521 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
HDLBP-236ENST00000477477 ATRXP46100 2492 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 APC2O95996 2303 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 PLXNB3Q9ULL4 1909 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3DA0A087WVF3 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3IA0A087WXS9 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3EA0A087X179 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3KA0A087X1G2 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3FA6NER0 549 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3LB9A6J9 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SLC7A4O43246 635 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3HP0C7X1 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 GGCXP38435 758 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 NXPH1P58417 271 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 PTK2Q05397 1052 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 ZNF177Q13360 481 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-236ENST00000477477 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 CCDC157Q569K6 752 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SLC45A4Q5BKX6 768 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 OTUD1Q5VV17 481 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3GQ6DHY5 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 OR6B2Q6IFH4 312 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3CQ6IPX1 549 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 NAPEPLDQ6IQ20 393 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 DHRS13Q6UX07 377 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SLC26A9Q7LBE3 791 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D3Q8IZP1 549 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SAP25Q8TEE9 199 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 FEM1AQ9BSK4 669 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 KDM4CQ9H3R0 1056 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SLC25A13Q9UJS0 675 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 SARDHQ9UL12 918 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 RAXQ9Y2V3 346 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 OR51B4Q9Y5P0 310 aa11.69□□□□□ -0.54
HDLBP-236ENST00000477477 PLXNA2O75051 1894 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 TMEM131Q92545 1883 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 NBEAQ8NFP9 2946 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 FAM149AA5PLN7 773 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 TRABD2BA6NFA1 517 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 C1QTNF3-AMACRE9PGA6 284 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 M0QYT0 321 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 TLR4O00206 839 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 CBX4O00257 560 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PLK4O00444 970 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ENC1O14682 589 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ALOX15BO15296 676 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PLRG1O43660 514 aaKnown RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 RTN2O75298 545 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PAGE1O75459 146 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 CLDN11O75508 207 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ITGAVP06756 1048 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 EPHA8P29322 1005 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 NOS2P35228 1153 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 KRT9P35527 623 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 NUDT1P36639 197 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 MTIF2P46199 727 aaKnown RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ARRB1P49407 418 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 SNX16P57768 344 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 DLG2Q15700 870 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 CAMK4Q16566 473 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 C5orf22Q49AR2 442 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 AGBL4Q5VU57 503 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 FAM46CQ5VWP2 391 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 C19orf48Q6RUI8 117 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 Q6ZVU0 165 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 C14orf80Q86SX3 495 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 SLC47A2Q86VL8 602 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 OXR1Q8N573 874 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 SH2D3CQ8N5H7 860 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ZNF397Q8NF99 534 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 CNDP2Q96KP4 475 aaKnown RBP11.68□□□□□ -0.54
HDLBP-236ENST00000477477 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ERVMER34-1Q9H9K5 563 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 VPS28Q9UK41 221 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 DNAJC12Q9UKB3 198 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PPM1HQ9ULR3 514 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 TBC1D30Q9Y2I9 924 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PCDHGA1Q9Y5H4 931 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 CELSR3Q9NYQ7 3312 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 ACACAQ13085 2346 aa11.68□□□□□ -0.54
HDLBP-236ENST00000477477 PTPRBP23467 1997 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 MCF2LO15068 1137 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 RFPL3O75679 317 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 LDOC1O95751 146 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 MAT2AP31153 395 aaKnown RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 CLCN1P35523 988 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms