RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ADAM7Q9H2U9 754 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 PDLIM7Q9NR12 457 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 CD274Q9NZQ7 290 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 HACD1B0YJ81 288 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 DDHD2O94830 711 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 HNRNPLP14866 589 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 CRYBB1P53674 252 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 VEPH1Q14D04 833 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 GRTP1Q5TC63 336 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 RAP1GAP2Q684P5 730 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 KYAT3Q6YP21 454 aaKnown RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 ATAD1Q8NBU5 361 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 ZSCAN18Q8TBC5 510 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-204ENST00000477421 TSPAN17Q96FV3 270 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 GPR63Q9BZJ6 419 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 SDK1Q7Z5N4 2213 aa11.24□□□□□ -0.61
COL27A1-204ENST00000477421 C5orf60A6NFR6 353 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 STX7O15400 261 aaKnown RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 RAMP2O60895 175 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 C2P06681 752 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 ELNP15502 786 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 ITGB6P18564 788 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 ALDH7A1P49419 539 aaKnown RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 LACTB2Q53H82 288 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CNTRLQ7Z7A1 2325 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 ZNF567Q8N184 647 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CEP70Q8NHQ1 597 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CDRT15Q96T59 188 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 DDX50Q9BQ39 737 aaKnown RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 SAR1AQ9NR31 198 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 KCNK4Q9NYG8 393 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 PCDHB7Q9Y5E2 793 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 LRIG2O94898 1065 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CD86P42081 329 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CYLC2Q14093 348 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 PREPLQ4J6C6 727 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 SPANXN3Q5MJ09 141 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 IYDQ6PHW0 289 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 LDB1Q86U70 411 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 SCAMP5Q8TAC9 235 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 SNX27Q96L92 541 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 AGAP2Q99490 1192 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CENPKQ9BS16 269 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 ACE2Q9BYF1 805 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 NSMCE4AQ9NXX6 385 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 NHSL1Q5SYE7 1610 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 PLCH1Q4KWH8 1693 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 FAM95CA0A1B0GW59 222 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 RASSF9O75901 435 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 THRAP10827 490 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 NFE2Q16621 373 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 FAM110CQ1W6H9 321 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CYP2R1Q6VVX0 501 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 STRADAQ7RTN6 431 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 PCDH20Q8N6Y1 951 aaKnown RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 CINPQ9BW66 212 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 UBE2OQ9C0C9 1292 aaKnown RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 EPB41L4BQ9H329 900 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 DENND2DQ9H6A0 471 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-204ENST00000477421 TRHDEQ9UKU6 1024 aa11.23□□□□□ -0.61
COL27A1-204ENST00000477421 SMIM35A0A1B0GVV1 85 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 F5H5T6 163 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 E2F6O75461 281 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 SRP72O76094 671 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 BPGMP07738 259 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 PAX7P23759 505 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 L1CAMP32004 1257 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 FLT3LGP49771 235 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 SLC34A1Q06495 639 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 PDE1CQ14123 709 aaPredicted RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 C6orf89Q6UWU4 347 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 BANPQ8N9N5 519 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 TEKT4Q8WW24 435 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 INPP5DQ92835 1189 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 EFCAB1Q9HAE3 211 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 STARD7Q9NQZ5 370 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 SNX13Q9Y5W8 968 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 hCG_2014768A0A024R1R8 64 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 STBD1O95210 358 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 GMPRP36959 345 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 RENBPP51606 427 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 ABCE1P61221 599 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 CDCA2Q69YH5 1023 aaPredicted RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 PTRHD1Q6GMV3 140 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 MRNIPQ6NTE8 343 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 NPLOC4Q8TAT6 608 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
COL27A1-204ENST00000477421 B3GALT6Q96L58 329 aa11.22□□□□□ -0.61
COL27A1-204ENST00000477421 TBL1YQ9BQ87 522 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms