RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 BBS2Q9BXC9 721 aa9.52□□□□□ -0.89
PGK1-204ENST00000477335 USP29Q9HBJ7 922 aa9.52□□□□□ -0.89
PGK1-204ENST00000477335 GTSE1Q9NYZ3 720 aa9.52□□□□□ -0.89
PGK1-204ENST00000477335 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.89
PGK1-204ENST00000477335 INTS6Q9UL03 887 aaKnown RBP9.52□□□□□ -0.89
PGK1-204ENST00000477335 NEU2Q9Y3R4 380 aa9.52□□□□□ -0.89
PGK1-204ENST00000477335 MYOFQ9NZM1 2061 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 LOC730098B7Z3J9 87 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 J3KR12 359 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 DFFAO00273 331 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 SLC9A3R1O14745 358 aaPredicted RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 NARSO43776 548 aaKnown RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 SNAP91O60641 907 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 MAFKO60675 156 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ZMPSTE24O75844 475 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 RHOCP08134 193 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ZSCAN5DPP0CG00 497 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 RBP3P10745 1247 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ETS1P14921 441 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 PSMC3P17980 439 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 RBL1P28749 1068 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 HLA-FP30511 346 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 OPRD1P41143 372 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 GARSP41250 739 aaKnown RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 SOX9P48436 509 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 NDST2P52849 883 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 GNA12Q03113 381 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ZNF177Q13360 481 aaPredicted RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 PDGFRLQ15198 375 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ANO4Q32M45 955 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 FUT11Q495W5 492 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 MPP7Q5T2T1 576 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 RNF219Q5W0B1 726 aaPredicted RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 TMEM215Q68D42 235 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 LEKR1Q6ZMV7 388 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 MTSS1LQ765P7 747 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 MFN1Q8IWA4 741 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 PHTF2Q8N3S3 785 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 E2F7Q96AV8 911 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 KRT12Q99456 494 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 NAP1L3Q99457 506 aaPredicted RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 TMEM121Q9BTD3 319 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 ACE2Q9BYF1 805 aaPredicted RBP9.51□□□□□ -0.89
PGK1-204ENST00000477335 ECT2Q9H8V3 914 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 PRDM16Q9HAZ2 1276 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 KCNK12Q9HB15 430 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 PDFQ9HBH1 243 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 FBXO10Q9UK96 956 aa9.51□□□□□ -0.89
PGK1-204ENST00000477335 CHD5Q8TDI0 1954 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 ILVBLA1L0T0 632 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 BCLAF3A2AJT9 711 aaKnown RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 CTAGE15A4D2H0 777 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 ZSCAN5CA6NGD5 496 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 SHISA7A6NL88 538 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 H0Y626 953 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 H7C0C1 242 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 MCF2LO15068 1137 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 CHADO15335 359 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 RAD51CO43502 376 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 CACNG3O60359 315 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 RAMP2O60895 175 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 NFATC1O95644 943 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 CD160O95971 181 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 CTAGE8P0CG41 777 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 CTSOP43234 321 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 ATP5OP48047 213 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 NR2C2P49116 596 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 ARF5P84085 180 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 PPIDQ08752 370 aaKnown RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 WASHC5Q12768 1159 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 ZBTB17Q13105 803 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 SERINC3Q13530 473 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 RUNX3Q13761 415 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 BYSLQ13895 437 aaKnown RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 NAA30Q147X3 362 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 POLD3Q15054 466 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 GEN1Q17RS7 908 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 SLC45A4Q5BKX6 768 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 DRICH1Q6PGQ1 229 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 KIAA0907Q7Z7F0 614 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 SETD3Q86TU7 594 aaPredicted RBP9.5□□□□□ -0.89
PGK1-204ENST00000477335 CTAGE6Q86UF2 777 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 CTAGE4Q8IX94 777 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 YAF2Q8IY57 180 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 MMGT1Q8N4V1 131 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 LZTR1Q8N653 840 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 ALLCQ8N6M5 410 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.5□□□□□ -0.89
PGK1-204ENST00000477335 CEP112Q8N8E3 955 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 FIBINQ8TAL6 211 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 MAIP1Q8WWC4 291 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 ATP2A3Q93084 1043 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 HDAC11Q96DB2 347 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 FEM1AQ9BSK4 669 aa9.5□□□□□ -0.89
PGK1-204ENST00000477335 TRMT61BQ9BVS5 477 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms