RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CAAP1Q9H8G2 361 aa15.57■□□□□ 0.08
CLSTN1-205ENST00000477264 RBM47A0AV96 593 aaKnown RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 TOP3BO95985 862 aaKnown RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 MLNP12872 115 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 PSMD8P48556 350 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 NDST2P52849 883 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 NRLP54845 237 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 CDH6P55285 790 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 WNT7BP56706 349 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 C21orf59P57076 290 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 PSMC1P62191 440 aaKnown RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 BCL2A1Q16548 175 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 TMEM53Q6P2H8 277 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 ZNF534Q76KX8 674 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 CLVS1Q8IUQ0 354 aaPredicted RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 SCAIQ8N9R8 606 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 C12orf43Q96C57 262 aaKnown RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 CEP170P1Q96L14 293 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 RNF157Q96PX1 679 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 UHRF1Q96T88 793 aaPredicted RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 TMEM79Q9BSE2 394 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 EFCAB1Q9HAE3 211 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 OLAHQ9NV23 265 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 TMEM9Q9P0T7 183 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 EPHA3P29320 983 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 PRKAA2P54646 552 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 SLC9B1Q4ZJI4 515 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 SAPCD2Q86UD0 394 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 PACRGLQ8N7B6 248 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 ATP6V0A1Q93050 837 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 ISL2Q96A47 359 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 THAP11Q96EK4 314 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 PLEKHA8Q96JA3 519 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 KLHL32Q96NJ5 620 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 EFHD1Q9BUP0 239 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 EIF2AQ9BY44 585 aaKnown RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 ZNF385DQ9H6B1 395 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 LIN28AQ9H9Z2 209 aaKnown RBP15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 CISHQ9NSE2 258 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 SLC38A7Q9NVC3 462 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 B3GNT3Q9Y2A9 372 aa15.56■□□□□ 0.08
CLSTN1-205ENST00000477264 SOWAHBA6NEL2 793 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 ZNF487B1APH4 448 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 SLCO1B7G3V0H7 640 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PSMD12O00232 456 aaPredicted RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 APOL1O14791 398 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 RNASEH2AO75792 299 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 RGS20O76081 388 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PRKCGP05129 697 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PGK2P07205 417 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 ARRB2P32121 409 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 SERPINB5P36952 375 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 ACOT2P49753 483 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 CCR3P51677 355 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 ART3Q13508 389 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 RGMBQ6NW40 437 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 DCLRE1AQ6PJP8 1040 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 MAMDC4Q6UXC1 1216 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 TTC30AQ86WT1 665 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 XYLT1Q86Y38 959 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 RASAL3Q86YV0 1011 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 KIAA0319LQ8IZA0 1049 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 TDRD5Q8NAT2 981 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 RCN3Q96D15 328 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 NAT9Q9BTE0 207 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PORCNQ9H237 461 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PDLIM7Q9NR12 457 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 UTP6Q9NYH9 597 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 SELENONQ9NZV5 590 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PCSK1NQ9UHG2 260 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 CNTNAP2Q9UHC6 1331 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 C7orf72A4D263 438 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 MANSC4A6NHS7 340 aaPredicted RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 SPATA31C2B4DYI2 1134 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 NOP56O00567 594 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 KCNA2P16389 499 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 CDH3P22223 829 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 SLC5A3P53794 718 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 MS4A2Q01362 244 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 WDR49Q8IV35 697 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 SLC15A3Q8IY34 581 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 ZNF781Q8N8C0 355 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 ADGRA2Q96PE1 1338 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PTPN18Q99952 460 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 PAIP1Q9H074 479 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 R3HDMLQ9H3Y0 253 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 COQ10BQ9H8M1 238 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 VTI1BQ9UEU0 232 aa15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 FAM32AQ9Y421 112 aaKnown RBP15.55■□□□□ 0.08
CLSTN1-205ENST00000477264 DYTNA2CJ06 578 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 TRIM64A6NGJ6 449 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 TRIM64BA6NI03 449 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 GCATO75600 419 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 ATG7O95352 703 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 ENO3P13929 434 aaPredicted RBP15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 DCKP27707 260 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 RBL1P28749 1068 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 MAGEA12P43365 314 aa15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 TRAP1Q12931 704 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-205ENST00000477264 MOGQ16653 247 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms