RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 RASGRP3Q8IV61 690 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 MAP4K3Q8IVH8 894 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 REM2Q8IYK8 340 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ADGRG2Q8IZP9 1017 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 AGGF1Q8N302 714 aaeCLIP3.93□□□□□ -1.78
LSM2-211ENST00000475835 RIBC1Q8N443 379 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 METTL25Q8N6Q8 603 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 UBL4BQ8N7F7 174 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ASCC1Q8N9N2 400 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 FSIP1Q8NA03 581 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TRPV3Q8NET8 790 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 VANGL1Q8TAA9 524 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 PIWIL2Q8TC59 973 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 DNAJA4Q8WW22 397 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 PYDC1Q8WXC3 89 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GATAD2BQ8WXI9 593 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 KLHL6Q8WZ60 621 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 POMGNT1Q8WZA1 660 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SMG7Q92540 1137 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 IP6K1Q92551 441 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 JADE3Q92613 823 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PRCCQ92733 491 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 RFT1Q96AA3 541 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 AKT1S1Q96B36 256 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TRIM43Q96BQ3 446 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 MTBPQ96DY7 904 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SLC10A4Q96EP9 437 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 HSPBAP1Q96EW2 488 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TMEM80Q96HE8 168 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 MAP6Q96JE9 813 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CCDC17Q96LX7 622 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ADAD1Q96M93 576 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 PRICKLE1Q96MT3 831 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 LENG8Q96PV6 779 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TRNT1Q96Q11 434 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 SNX18Q96RF0 628 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PNKPQ96T60 521 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 FERMT1Q9BQL6 677 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CNPY3Q9BT09 278 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RUSC1Q9BVN2 902 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 STRA6Q9BX79 667 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TDRD1Q9BXT4 1180 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TXLNGYQ9BZA5 131 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 HOXD1Q9GZZ0 328 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 ASCC2Q9H1I8 757 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 NUP62CLQ9H1M0 184 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RHBGQ9H310 441 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RNF41Q9H4P4 317 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ALG2Q9H553 416 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TUT1Q9H6E5 874 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TASP1Q9H6P5 420 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SLA2Q9H6Q3 261 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TDRD3Q9H7E2 651 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 CNOT10Q9H9A5 744 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 CBX8Q9HC52 389 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PANK4Q9NVE7 773 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 DNAJC17Q9NVM6 304 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TRNAU1APQ9NX07 287 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 SUCOQ9UBS9 1254 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 RSL24D1Q9UHA3 163 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 CNOT7Q9UIV1 285 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 STOML2Q9UJZ1 356 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TRHDEQ9UKU6 1024 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SMG5Q9UPR3 1016 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 TNFSF13BQ9Y275 285 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 GPR52Q9Y2T5 361 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 TDRKHQ9Y2W6 561 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 ZDHHC9Q9Y397 364 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 PCDHGA9Q9Y5G4 932 aaKnown RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 SNX14Q9Y5W7 946 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 RGPD8O14715 1765 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 LTN1O94822 1766 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 KDM3BQ7LBC6 1761 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 MYH7BA7E2Y1 1941 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 CEP170BQ9Y4F5 1589 aaPredicted RBP3.93□□□□□ -1.78
LSM2-211ENST00000475835 UMODL1Q5DID0 1318 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SPATA31A3Q5VYP0 1347 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 SALL1Q9NSC2 1324 aa3.93□□□□□ -1.78
LSM2-211ENST00000475835 UBR1Q8IWV7 1749 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 A2ML1A8K2U0 1454 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 CEMIPQ8WUJ3 1361 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 AGLP35573 1532 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 MYH8P13535 1937 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 USP54Q70EL1 1684 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 TMEM82A0PJX8 343 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 PQLC2LA1A4F0 135 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 FAM47DPA6NHR8 397 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 HMX3A6NHT5 357 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 OR6C70A6NIJ9 312 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ZNF839A8K0R7 811 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 F5H0A9 414 aaPredicted RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 hCG_2039718K7EN88 272 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 M0R2N6 131 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 M0R3H8 397 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 AGPSO00116 658 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 NOP56O00567 594 aaKnown RBP3.92□□□□□ -1.78
LSM2-211ENST00000475835 TRIM38O00635 465 aa3.92□□□□□ -1.78
LSM2-211ENST00000475835 ATP2A1O14983 1001 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms