RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 USP7Q93009 1102 aa10.35□□□□□ -0.75
CCHCR1-212ENST00000475684 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
CCHCR1-212ENST00000475684 PPP1R13BQ96KQ4 1090 aa10.35□□□□□ -0.75
CCHCR1-212ENST00000475684 CATSPER2Q96P56 530 aa10.35□□□□□ -0.75
CCHCR1-212ENST00000475684 GFM1Q96RP9 751 aaKnown RBP10.35□□□□□ -0.75
CCHCR1-212ENST00000475684 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
CCHCR1-212ENST00000475684 ZFHX3Q15911 3703 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 CELSR1Q9NYQ6 3014 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 WIPF3A6NGB9 483 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 TPP1O14773 563 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 KIAA0391O15091 583 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 EPB41L2O43491 1005 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SLC26A4O43511 780 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 KIF20AO95235 890 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 CSF2P04141 144 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SRPRAP08240 638 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SLFN14P0C7P3 912 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SLC6A4P31645 630 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 NOS2P35228 1153 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 UBA7P41226 1012 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 CTSOP43234 321 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 CNTN1Q12860 1018 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 ELAVL3Q14576 367 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 TRIP4Q15650 581 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 BMT2Q1RMZ1 405 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 ADGRF1Q5T601 910 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 RNF219Q5W0B1 726 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 OR6B2Q6IFH4 312 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SCARA5Q6ZMJ2 495 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 DCP2Q8IU60 420 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 MFN1Q8IWA4 741 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 ZNF557Q8N988 423 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 TEX19Q8NA77 164 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 PTPRN2Q92932 1015 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 FAM131CQ96AQ9 280 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 TMEM74Q96NL1 305 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 BOCQ9BWV1 1114 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SDCBP2Q9H190 292 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 XYLT2Q9H1B5 865 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 PNPLA8Q9NP80 782 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 STIM2Q9P246 746 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SLCO3A1Q9UIG8 710 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 PADI4Q9UM07 663 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 CEP83Q9Y592 693 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 PDZD2O15018 2839 aa10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SETD2Q9BYW2 2564 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-212ENST00000475684 SPTBN1Q01082 2364 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 ADGRG4Q8IZF6 3080 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 KIF26BQ2KJY2 2108 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 A0A1W2PQU0 124 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 A6NNZ2 444 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 C9orf172C9J069 976 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 PHACTR2O75167 634 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 NME1P15531 152 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 HNRNPA2B1P22626 353 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 CD82P27701 267 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 CCKBRP32239 447 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 ETV5P41161 510 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 ATP1A2P50993 1020 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 CASP5P51878 434 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 ECT2LQ008S8 904 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 FZD2Q14332 565 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 MPP7Q5T2T1 576 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 GCNT7Q6ZNI0 430 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 PTAR1Q7Z6K3 402 aaPredicted RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 SLC35F3Q8IY50 421 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 CRYBG2Q8N1P7 616 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 ARHGAP18Q8N392 663 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 FIBINQ8TAL6 211 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 LARP4BQ92615 738 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 CCDC127Q96BQ5 260 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 LMLNQ96KR4 655 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 HEXIM2Q96MH2 286 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 CASS4Q9NQ75 786 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 DONSONQ9NYP3 566 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 DKK3Q9UBP4 350 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 IPO11Q9UI26 975 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 STOML2Q9UJZ1 356 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 INTS6Q9UL03 887 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 USP3Q9Y6I4 520 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 ITIH6Q6UXX5 1313 aa10.33□□□□□ -0.76
CCHCR1-212ENST00000475684 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 D6RAR5 112 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 STMND1H3BQB6 276 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 LIFP15018 202 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 JUNDP17535 347 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 GAP43P17677 238 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 TRIM21P19474 475 aaKnown RBP10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 NDST1P52848 882 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 ADKP55263 362 aaKnown RBP10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 YWHAGP61981 247 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 CCL7P80098 99 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 ZNF284Q2VY69 593 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 ZNF699Q32M78 642 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 ZNF667Q5HYK9 610 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 PITRM1Q5JRX3 1037 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
CCHCR1-212ENST00000475684 PIK3R6Q5UE93 754 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms