RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 BTBD3Q9Y2F9 522 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
U2AF1-209ENST00000475639 TBKBP1A7MCY6 615 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 MATN2O00339 956 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SPTLC1O15269 473 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 DENRO43583 198 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 EFHC1Q5JVL4 640 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 UTP15Q8TED0 518 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SHCBP1LQ9BZQ2 653 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TRPC7Q9HCX4 862 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 RAD54BQ9Y620 910 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 A0A1W2PRG6 482 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 DNAJA2O60884 412 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 ANXA9O76027 345 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 PABPC1P11940 636 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 PCSK1P29120 753 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CPOXP36551 454 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 PLIN5Q00G26 463 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 IL5RAQ01344 420 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 APOFQ13790 326 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SNRNP48Q6IEG0 339 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 HAS1Q92839 578 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 FAM120BQ96EK7 910 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TINF2Q9BSI4 451 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 BCL2L14Q9BZR8 327 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 IKZF4Q9H2S9 585 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TRPV5Q9NQA5 729 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CMTM6Q9NX76 183 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 PLK2Q9NYY3 685 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 COMMD9Q9P000 198 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 LAMB1P07942 1786 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CAPN15O75808 1086 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 STIP1P31948 543 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TMEM132BQ14DG7 1078 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SNX17Q15036 470 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TIMM50Q3ZCQ8 353 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CBWD6Q4V339 395 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CBWD3Q5JTY5 395 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CBWD5Q5RIA9 395 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 UBASH3BQ8TF42 649 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 RORBQ92753 470 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TAGLN3Q9UI15 199 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 COQ6Q9Y2Z9 468 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SLCO1B7G3V0H7 640 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CST8O60676 142 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 MTA2O94776 668 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 NAT1P18440 290 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 NFYCQ13952 458 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 SPIDRQ14159 915 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 NECAB2Q7Z6G3 386 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 ERI1Q8IV48 349 aaKnown RBP11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 POLR1BQ9H9Y6 1135 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 CROTQ9UKG9 612 aa11.72□□□□□ -0.53
U2AF1-209ENST00000475639 TRPM3Q9HCF6 1732 aaPredicted RBP11.71□□□□□ -0.53
U2AF1-209ENST00000475639 BCLAF3A2AJT9 711 aaKnown RBP11.71□□□□□ -0.53
U2AF1-209ENST00000475639 FUOMA2VDF0 154 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF682O95780 498 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 CHI3L1P36222 383 aaPredicted RBP11.71□□□□□ -0.53
U2AF1-209ENST00000475639 ACADSBP45954 432 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 TRAF2Q12933 501 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 FUT11Q495W5 492 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 POU5F2Q8N7G0 328 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 RNF149Q8NC42 400 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 SLITRK1Q96PX8 696 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 PLGRKTQ9HBL7 147 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF624Q9P2J8 865 aaPredicted RBP11.71□□□□□ -0.53
U2AF1-209ENST00000475639 LAMB2P55268 1798 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 PIK3CDO00329 1044 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 SLC16A3O15427 465 aaKnown RBP11.71□□□□□ -0.53
U2AF1-209ENST00000475639 GLRA3O75311 464 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 VPS26AO75436 327 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 TADA2AO75478 443 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 TGM3Q08188 693 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 KCNT1Q5JUK3 1230 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 PMF1Q6P1K2 205 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms