RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 WDTC1Q8N5D0 677 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
COPS7B-219ENST00000474042 OR52K2Q8NGK3 314 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 SHC3Q92529 594 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 KDM4CQ9H3R0 1056 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 SLC12A6Q9UHW9 1150 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 OR51B4Q9Y5P0 310 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 LOC400499M0QZD8 3231 aa13.79□□□□□ -0.2
COPS7B-219ENST00000474042 A0A087WV48 116 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 CBX4O00257 560 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 ALOX15BO15296 676 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 HSF2BPO75031 334 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 RFPL3O75679 317 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 FGFR1OPO95684 399 aaKnown RBP13.78□□□□□ -0.2
COPS7B-219ENST00000474042 ITGAVP06756 1048 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 ABCB4P21439 1286 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 NUDT1P36639 197 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 RXRGP48443 463 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 NUMBP49757 651 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 CYP4F3Q08477 520 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 MTA1Q13330 715 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-219ENST00000474042 CCDC157Q569K6 752 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 AGBL4Q5VU57 503 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 OTUD1Q5VV17 481 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-219ENST00000474042 OLFML1Q6UWY5 402 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 TRIM69Q86WT6 500 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 SPATS2Q86XZ4 545 aaKnown RBP13.78□□□□□ -0.2
COPS7B-219ENST00000474042 OXR1Q8N573 874 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 MFSD2AQ8NA29 543 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 TSC1Q92574 1164 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 CNDP2Q96KP4 475 aaKnown RBP13.78□□□□□ -0.2
COPS7B-219ENST00000474042 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 ARHGAP20Q9P2F6 1191 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 KNTC1P50748 2209 aa13.78□□□□□ -0.2
COPS7B-219ENST00000474042 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 TLR4O00206 839 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 PLK4O00444 970 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 RTN2O75298 545 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 DAB1O75553 588 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 LDOC1O95751 146 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 C1SP09871 688 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 CDK4P11802 303 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 SLC9A1P19634 815 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 ARRB1P49407 418 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 APBA1Q02410 837 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 DNAJC3Q13217 504 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 AUHQ13825 339 aaKnown RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 BECN1Q14457 450 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 C5orf22Q49AR2 442 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 EFHC1Q5JVL4 640 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 FAM183BPQ6ZVS7 135 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 SLC26A9Q7LBE3 791 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 DSG4Q86SJ6 1040 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 IQCHQ86VS3 1027 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 PASD1Q8IV76 773 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 HNRNPLLQ8WVV9 542 aaKnown RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 NXPE2Q96DL1 559 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 PPP1R13BQ96KQ4 1090 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 RPRD1AQ96P16 312 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 AJAP1Q9UKB5 411 aaPredicted RBP13.77□□□□□ -0.21
COPS7B-219ENST00000474042 DMTF1Q9Y222 760 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 HS3ST4Q9Y661 456 aa13.77□□□□□ -0.21
COPS7B-219ENST00000474042 SYNJ2BP-COX16A0A087WUM0 186 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3DA0A087WVF3 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3IA0A087WXS9 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3EA0A087X179 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3KA0A087X1G2 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3FA6NER0 549 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3LB9A6J9 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 C1QTNF3-AMACRE9PGA6 284 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 MCF2LO15068 1137 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 GRAP2O75791 330 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 ERBB2P04626 1255 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3HP0C7X1 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 GGCXP38435 758 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 CLDN6P56747 220 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 OVGP1Q12889 678 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3GQ6DHY5 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3CQ6IPX1 549 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 FBXL19Q6PCT2 694 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 GBP6Q6ZN66 633 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms