RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ERVFC1P60507 584 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 TXNL4AP83876 142 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 SP4Q02446 784 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 LLGL1Q15334 1064 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 MARCH8Q5T0T0 291 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 DEPDC1Q5TB30 811 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 IYDQ6PHW0 289 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 DCDC5Q6ZRR9 648 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 C1orf186Q6ZWK4 172 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 SLC47A2Q86VL8 602 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 ANKMY2Q8IV38 441 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 TMEM105Q8N8V8 129 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 CHPT1Q8WUD6 406 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 DDX1Q92499 740 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 SRPK1Q96SB4 655 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 SMOC2Q9H3U7 446 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 MRPL47Q9HD33 250 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 PNPLA8Q9NP80 782 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 THAP1Q9NVV9 213 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 RAB20Q9NX57 234 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 SELENONQ9NZV5 590 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 DNPEPQ9ULA0 475 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 APOBEC2Q9Y235 224 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 KAT6AQ92794 2004 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 NRCAMQ92823 1304 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 PLXNA4Q9HCM2 1894 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 MEIS1O00470 390 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ZBTB5O15062 677 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 CNOT3O75175 753 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 GSTT2P0CG29 244 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 GSTT2BP0CG30 244 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 UNGP13051 313 aaPredicted RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 PSMC3P17980 439 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 CDH3P22223 829 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 SSTR1P30872 391 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 L1CAMP32004 1257 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NBL1P41271 181 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 CCR3P51677 355 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ESRRGP62508 458 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 STX3Q13277 289 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 EFTUD2Q15029 972 aaKnown RBP eCLIP10.31□□□□□ -0.76
APTX-216ENST00000472896 DUSP6Q16828 381 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 SYCE2Q6PIF2 218 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ELMSAN1Q6PJG2 1045 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ENOSF1Q7L5Y1 443 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 RSPH3Q86UC2 560 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NPAS4Q8IUM7 802 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NUDCD3Q8IVD9 361 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 SAMD3Q8N6K7 520 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 FBXO36Q8NEA4 188 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 KREMEN1Q96MU8 473 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 KLF6Q99612 283 aaPredicted RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 TMEM206Q9H813 350 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ACP6Q9NPH0 428 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 DNAJC28Q9NX36 388 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 GIN1Q9NXP7 522 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 VPS28Q9UK41 221 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 APPL1Q9UKG1 709 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ARHGAP26Q9UNA1 814 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 B3GNT3Q9Y2A9 372 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 A0A0B4J269 797 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 MBLAC1A4D2B0 266 aaPredicted RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 MEI4A8MW99 385 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ADAM23O75077 832 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 KRT37O76014 449 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 FBXO21O94952 628 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 H6PDO95479 791 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 SNRPAP09012 282 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 COL6A2P12110 1019 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ITGAXP20702 1163 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 TTKP33981 857 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 MXI1P50539 228 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 ERFP50548 548 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 C21orf59P57076 290 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 RPS3AP61247 264 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 TRPC3Q13507 836 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 TUBB3Q13509 450 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 KCNC3Q14003 757 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 DPYSQ14117 519 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 UBAP2LQ14157 1087 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 OASLQ15646 514 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 CHI3L2Q15782 390 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 HP1BP3Q5SSJ5 553 aaPredicted RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 STXBP5Q5T5C0 1151 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 LRRC38Q5VT99 294 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 TAF2Q6P1X5 1199 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 SLC2A7Q6PXP3 512 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 PDIK1LQ8N165 341 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 POU5F2Q8N7G0 328 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NAT8LQ8N9F0 302 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 KREMEN2Q8NCW0 462 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 VCPIP1Q96JH7 1222 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms