RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GNA12Q03113 381 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 PTPRNQ16849 979 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 SMTNL2Q2TAL5 461 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 DAB2IPQ5VWQ8 1189 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 RFX8Q6ZV50 586 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 CYB5D2Q8WUJ1 264 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 HSPH1Q92598 858 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 NELL1Q92832 810 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 KCTD15Q96SI1 283 aaPredicted RBP15.5■□□□□ 0.07
SNX13-205ENST00000471744 ACOX2Q99424 681 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 MAGEB5Q9BZ81 275 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 TMEM245Q9H330 911 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.5■□□□□ 0.07
SNX13-205ENST00000471744 C2orf42Q9NWW7 574 aa15.5■□□□□ 0.07
SNX13-205ENST00000471744 ANTXRLA6NF34 631 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 TMEM110-MUSTN1A8MSY1 372 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 H0Y858 1186 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 RAMP2O60895 175 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 CNR2P34972 360 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 WASP42768 502 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 SLC20A2Q08357 652 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 KRT81Q14533 505 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 PDK2Q15119 407 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
SNX13-205ENST00000471744 CA9Q16790 459 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 KCNT1Q5JUK3 1230 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 LRRC38Q5VT99 294 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 RETSATQ6NUM9 610 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 TMEM92Q6UXU6 159 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 WDR5BQ86VZ2 330 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 LONP2Q86WA8 852 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 MAP7D3Q8IWC1 876 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 LRRC8AQ8IWT6 810 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 UMODL1-AS1Q8N2C9 162 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 ACRBPQ8NEB7 543 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 OR52K2Q8NGK3 314 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 HHIPQ96QV1 700 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 ZDHHC4Q9NPG8 344 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 DNAI1Q9UI46 699 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 HPCAL4Q9UM19 191 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 REXO2Q9Y3B8 237 aaKnown RBP15.49■□□□□ 0.07
SNX13-205ENST00000471744 EML5Q05BV3 1969 aa15.49■□□□□ 0.07
SNX13-205ENST00000471744 NYNRINQ9P2P1 1898 aaKnown RBP15.48■□□□□ 0.07
SNX13-205ENST00000471744 A0A0D9SEW6 157 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 A0A1W2PQF6 199 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 TCRBV21S2A2A0A5A6 115 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 ZSCAN5CA6NGD5 496 aaPredicted RBP15.48■□□□□ 0.07
SNX13-205ENST00000471744 AXIN1O15169 862 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 EPHX1P07099 455 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 TCF4P15884 667 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 GOT1P17174 413 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 CLCN6P51797 869 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 NDST2P52849 883 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 CDH6P55285 790 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 GEMIN4P57678 1058 aaKnown RBP15.48■□□□□ 0.07
SNX13-205ENST00000471744 KIF5AQ12840 1032 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 GSE1Q14687 1217 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 POLD3Q15054 466 aaPredicted RBP15.48■□□□□ 0.07
SNX13-205ENST00000471744 PARP15Q460N3 678 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 C11orf63Q6NUN7 778 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 TSSK4Q6SA08 328 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 ZBTB44Q8NCP5 570 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 FAM71BQ8TC56 605 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 ATRIPQ8WXE1 791 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 ATOH1Q92858 354 aaPredicted RBP15.48■□□□□ 0.07
SNX13-205ENST00000471744 MRGPRX3Q96LB0 322 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 ATP13A1Q9HD20 1204 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 CWC15Q9P013 229 aaKnown RBP15.48■□□□□ 0.07
SNX13-205ENST00000471744 BCCIPQ9P287 314 aaKnown RBP eCLIP15.48■□□□□ 0.078e-7■■■■□ 21.9
SNX13-205ENST00000471744 HS3ST2Q9Y278 367 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 PLXND1Q9Y4D7 1925 aa15.48■□□□□ 0.07
SNX13-205ENST00000471744 EDDM13A0A1B0GTR0 161 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 TARSL2A2RTX5 802 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 WASH3PC4AMC7 463 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 SPOPO43791 374 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 ERCC2P18074 760 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 PRKCHP24723 683 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 CAMK2GQ13555 558 aaPredicted RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 BYSLQ13895 437 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 DPYSQ14117 519 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 HNRNPA1L2Q32P51 320 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 ZFYVE27Q5T4F4 411 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 IL31Q6EBC2 164 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 TXNRD3NBQ6F5E7 133 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 ANO7Q6IWH7 933 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 METTL3Q86U44 580 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 VSIG1Q86XK7 387 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 RHOT1Q8IXI2 618 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 KCTD6Q8NC69 237 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 OR7D4Q8NG98 312 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 ARHGEF2Q92974 986 aaKnown RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 MYO19Q96H55 970 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 PSMB7Q99436 277 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 ZNF670Q9BS34 389 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 SPON2Q9BUD6 331 aa15.47■□□□□ 0.07
SNX13-205ENST00000471744 ACE2Q9BYF1 805 aaPredicted RBP15.47■□□□□ 0.07
SNX13-205ENST00000471744 TSGA10Q9BZW7 698 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms