RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 PRELID2Q8N945 189 aa29.57■■■□□ 2.32
SOD1-203ENST00000470944 NECAB3Q96P71 396 aaPredicted RBP29.57■■■□□ 2.32
SOD1-203ENST00000470944 GGA2Q9UJY4 613 aa29.57■■■□□ 2.32
SOD1-203ENST00000470944 DUSP12Q9UNI6 340 aa29.57■■■□□ 2.32
SOD1-203ENST00000470944 YBEYP58557 167 aaPredicted RBP29.56■■■□□ 2.32
SOD1-203ENST00000470944 GALNT2Q10471 571 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 GEN1Q17RS7 908 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 PARP15Q460N3 678 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 TXNDC11Q6PKC3 985 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 ZC3H18Q86VM9 953 aaKnown RBP29.56■■■□□ 2.32
SOD1-203ENST00000470944 PHTF2Q8N3S3 785 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 NAP1L3Q99457 506 aaPredicted RBP29.56■■■□□ 2.32
SOD1-203ENST00000470944 SPON2Q9BUD6 331 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 MAGEH1Q9H213 219 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 FBRSL1Q9HCM7 1045 aaKnown RBP29.56■■■□□ 2.32
SOD1-203ENST00000470944 DEC1Q9P2X7 70 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 SORCS3Q9UPU3 1222 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 PIAS3Q9Y6X2 628 aa29.56■■■□□ 2.32
SOD1-203ENST00000470944 GLDCP23378 1020 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 KDSRQ06136 332 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 FUT11Q495W5 492 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 ZNF783Q6ZMS7 281 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 SFTPA1Q8IWL2 248 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 LGMNQ99538 433 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 C10orf88Q9H8K7 445 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 RNF14Q9UBS8 474 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 VPS28Q9UK41 221 aa29.55■■■□□ 2.32
SOD1-203ENST00000470944 SPECC1L-ADORA2AF8WAN1 911 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 KRIT1O00522 736 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 PABPC1P11940 636 aaKnown RBP29.54■■■□□ 2.32
SOD1-203ENST00000470944 CTHP32929 405 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 SERINC3Q13530 473 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 PLEKHG6Q3KR16 790 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 TMEM215Q68D42 235 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 IL31Q6EBC2 164 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.54■■■□□ 2.32
SOD1-203ENST00000470944 SLC27A6Q9Y2P4 619 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 GARSP41250 739 aaKnown RBP29.54■■■□□ 2.32
SOD1-203ENST00000470944 PAFAH1B1P43034 410 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 PFKPQ01813 784 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 PITRM1Q5JRX3 1037 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 FAM182AQ5T1J6 154 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 GRAMD4Q6IC98 578 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 KIAA0907Q7Z7F0 614 aaPredicted RBP29.54■■■□□ 2.32
SOD1-203ENST00000470944 ADIPOR2Q86V24 386 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 GJD3Q8N144 294 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 ZNF557Q8N988 423 aaPredicted RBP29.54■■■□□ 2.32
SOD1-203ENST00000470944 TTC13Q8NBP0 860 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 MAIP1Q8WWC4 291 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 ACE2Q9BYF1 805 aaPredicted RBP29.54■■■□□ 2.32
SOD1-203ENST00000470944 ATP13A1Q9HD20 1204 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 DNPEPQ9ULA0 475 aa29.54■■■□□ 2.32
SOD1-203ENST00000470944 NUP205Q92621 2012 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 ARHGAP42A6NI28 874 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 J3KR12 359 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 SNAP91O60641 907 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 EIF3EP60228 445 aaKnown RBP29.53■■■□□ 2.32
SOD1-203ENST00000470944 SNX1Q13596 522 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 ZNF354CQ86Y25 554 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 SLC35B2Q8TB61 432 aa29.53■■■□□ 2.32
SOD1-203ENST00000470944 OXCT1P55809 520 aa29.52■■■□□ 2.32
SOD1-203ENST00000470944 LEKR1Q6ZMV7 388 aa29.52■■■□□ 2.32
SOD1-203ENST00000470944 CCNYQ8ND76 341 aa29.52■■■□□ 2.32
SOD1-203ENST00000470944 IPO11Q9UI26 975 aaKnown RBP29.52■■■□□ 2.32
SOD1-203ENST00000470944 ACTL7AQ9Y615 435 aa29.52■■■□□ 2.32
SOD1-203ENST00000470944 RAD54BQ9Y620 910 aa29.52■■■□□ 2.32
SOD1-203ENST00000470944 SHISA7A6NL88 538 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 PRRT4C9JH25 899 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 CBX4O00257 560 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 LIASO43766 372 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 MAFKO60675 156 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 EIF2DP41214 584 aaKnown RBP29.51■■■□□ 2.32
SOD1-203ENST00000470944 GALK1P51570 392 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 PLK1P53350 603 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 SLC12A1Q13621 1099 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 PDK1Q15118 436 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 SLC44A4Q53GD3 710 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.51■■■□□ 2.324e-9■■■■□ 23.8
SOD1-203ENST00000470944 ATPAF2Q8N5M1 289 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 PNKPQ96T60 521 aa29.51■■■□□ 2.32
SOD1-203ENST00000470944 NYNRINQ9P2P1 1898 aaKnown RBP29.51■■■□□ 2.32
SOD1-203ENST00000470944 MCF2LO15068 1137 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 RBP3P10745 1247 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 MX2P20592 715 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 CCNG2Q16589 344 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 KCTD19Q17RG1 926 aaPredicted RBP29.51■■■□□ 2.31
SOD1-203ENST00000470944 WHAMMP3Q1A5X7 153 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 BZW1Q7L1Q6 419 aaKnown RBP29.51■■■□□ 2.31
SOD1-203ENST00000470944 RALGPS2Q86X27 583 aaPredicted RBP29.51■■■□□ 2.31
SOD1-203ENST00000470944 AHI1Q8N157 1196 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 HDAC11Q96DB2 347 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 P2RY13Q9BPV8 354 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 VPS51Q9UID3 782 aa29.51■■■□□ 2.31
SOD1-203ENST00000470944 CHD5Q8TDI0 1954 aa29.5■■■□□ 2.31
SOD1-203ENST00000470944 KIAA1549LQ6ZVL6 1849 aa29.5■■■□□ 2.31
SOD1-203ENST00000470944 ANTXRLA6NF34 631 aa29.5■■■□□ 2.31
SOD1-203ENST00000470944 NCAM2O15394 837 aa29.5■■■□□ 2.31
SOD1-203ENST00000470944 KDELR3O43731 214 aa29.5■■■□□ 2.31
SOD1-203ENST00000470944 ZMPSTE24O75844 475 aa29.5■■■□□ 2.31
SOD1-203ENST00000470944 ETFBP38117 255 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms