RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TBCAO75347 108 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GCNT3O95395 438 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 DNTTP04053 509 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CR2P20023 1033 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 TGM2P21980 687 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GARTP22102 1010 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 HOXD9P28356 352 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ADORA2BP29275 332 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GSTT1P30711 240 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CORO1AP31146 461 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CD70P32970 193 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ADH7P40394 386 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 RXRGP48443 463 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ZNF132P52740 706 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CYP4F2P78329 520 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 TLE1Q04724 770 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 EFEMP1Q12805 493 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 DRAP1Q14919 205 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ANKRD1Q15327 319 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 DUOXA2Q1HG44 320 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 INAVAQ3KP66 663 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ZSCAN23Q3MJ62 389 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ARL13BQ3SXY8 428 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ELOA3BQ3SY89 546 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 POM121L1PQ3SYA9 428 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 FNDC3BQ53EP0 1204 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 C10orf120Q5SQS8 335 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CRTC1Q6UUV9 634 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 SCARA5Q6ZMJ2 495 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ZNF574Q6ZN55 896 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 SLCO4C1Q6ZQN7 724 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CHST9Q7L1S5 443 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 AADATQ8N5Z0 425 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GOLGA6L1Q8N7Z2 621 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ELOA3Q8NG57 546 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 SLC2A14Q8TDB8 520 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GANCQ8TET4 914 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 UCMAQ8WVF2 138 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 LARP4BQ92615 738 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CCDC127Q96BQ5 260 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 MYEOVQ96EZ4 313 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ATXN7L3BQ96GX2 97 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 EPSTI1Q96J88 318 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ACCSQ96QU6 501 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 TWNKQ96RR1 684 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 BHLHE41Q9C0J9 482 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 RBSNQ9H1K0 784 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 PABPC3Q9H361 631 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 MRPL44Q9H9J2 332 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 LIN7BQ9HAP6 207 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 SGK2Q9HBY8 427 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 CSNK1G1Q9HCP0 422 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 DMAP1Q9NPF5 467 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GDF3Q9NR23 364 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 TLR8Q9NR97 1041 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 METTL5Q9NRN9 209 aaKnown RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ABCB8Q9NUT2 735 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 FBXL12Q9NXK8 326 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 ARHGAP20Q9P2F6 1191 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 RASAL2Q9UJF2 1139 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 SRPK3Q9UPE1 567 aa5.51□□□□□ -1.53
PTPN4-209ENST00000469511 HEMK1Q9Y5R4 338 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-209ENST00000469511 GOLGA6L7A0A1B0GV03 622 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 BLACEA4D250 179 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 CLEC18AA5D8T8 446 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 J3QW42 95 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 AGRPO00253 132 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 NPC1O15118 1278 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 CLIC2O15247 247 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 NOBOXO60393 691 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 KRT38O76015 456 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 NEBLO76041 1014 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 VNN1O95497 513 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 LDHAP00338 332 aaKnown RBP5.5□□□□□ -1.53
PTPN4-209ENST00000469511 GHRHP01286 108 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 TNNC2P02585 160 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 AFPP02771 609 aaKnown RBP5.5□□□□□ -1.53
PTPN4-209ENST00000469511 NTRK1P04629 796 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 DLATP10515 647 aaKnown RBP5.5□□□□□ -1.53
PTPN4-209ENST00000469511 CDK4P11802 303 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ACPPP15309 386 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 VAV1P15498 845 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 GJB2P29033 226 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 MAT2AP31153 395 aaKnown RBP5.5□□□□□ -1.53
PTPN4-209ENST00000469511 UBA7P41226 1012 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ST13P50502 369 aaKnown RBP5.5□□□□□ -1.53
PTPN4-209ENST00000469511 UCNP55089 124 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ERVPABLB-1P60509 514 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ILKQ13418 452 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 SKIDA1Q1XH10 827 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ISXQ2M1V0 245 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ZNF542PQ5EBM4 170 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 MBLAC2Q68D91 279 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 CLEC18BQ6UXF7 455 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 CCDC81Q6ZN84 652 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 ATG14Q6ZNE5 492 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 CLEC20AQ6ZU45 233 aa5.5□□□□□ -1.53
PTPN4-209ENST00000469511 KIAA0907Q7Z7F0 614 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms