RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 CHRNA4P43681 627 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 ARPP19P56211 112 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 CDC42EP1Q00587 391 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 ARL13BQ3SXY8 428 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 ANKRD20A4Q4UJ75 823 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 NAPRTQ6XQN6 538 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 TFAP2DQ7Z6R9 452 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 DENND6AQ8IWF6 608 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 FTHL17Q9BXU8 183 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 WDR55Q9H6Y2 383 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-221ENST00000469415 FBXW11Q9UKB1 542 aa18.22■□□□□ 0.51
MCF2L-221ENST00000469415 HACD1B0YJ81 288 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 GLRA3O75311 464 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 CHRNGP07510 517 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 ABL2P42684 1182 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 MRPS6P82932 125 aaKnown RBP18.21■□□□□ 0.51
MCF2L-221ENST00000469415 ITKQ08881 620 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 KCNMB4Q86W47 210 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF781Q8N8C0 355 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 NRG4Q8WWG1 115 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 OSBPL1AQ9BXW6 950 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 DNAI2Q9GZS0 605 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 LNPEPQ9UIQ6 1025 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 MGEA5O60502 916 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 MARK2Q7KZI7 788 aaKnown RBP18.21■□□□□ 0.51
MCF2L-221ENST00000469415 MAVSQ7Z434 540 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 PHTF2Q8N3S3 785 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 FAM136AQ96C01 138 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 TASP1Q9H6P5 420 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 LRRC40Q9H9A6 602 aa18.21■□□□□ 0.51
MCF2L-221ENST00000469415 VAPBO95292 243 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 C2P06681 752 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 GNAZP19086 355 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 GRIK1P39086 918 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 GLUD2P49448 558 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 ISLR2Q6UXK2 745 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 CNTD1Q8N815 330 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 NMRK1Q9NWW6 199 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 COPG2Q9UBF2 871 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PLXNB2O15031 1838 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 GABRDO14764 452 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 HMBSP08397 361 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PEX19P40855 299 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 MAXP61244 160 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 MPP3Q13368 585 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 CST9Q5W186 159 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 FAM43BQ6ZT52 329 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-221ENST00000469415 EPAS1Q99814 870 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 DCLRE1BQ9H816 532 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 ABI2Q9NYB9 513 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-221ENST00000469415 SLC2A6Q9UGQ3 507 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PRG3Q9Y2Y8 225 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PROCP04070 461 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PRKCGP05129 697 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 MPP1Q00013 466 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 GRM3Q14832 879 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 TCHHL1Q5QJ38 904 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-221ENST00000469415 NXNQ6DKJ4 435 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 CCNYL1Q8N7R7 359 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 OR10T2Q8NGX3 314 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 DQX1Q8TE96 717 aaKnown RBP18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PYDC1Q8WXC3 89 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 DNAJC9Q8WXX5 260 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 SLC2A13Q96QE2 648 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 NOD1Q9Y239 953 aa18.2■□□□□ 0.5
MCF2L-221ENST00000469415 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 TRAFD1O14545 582 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 SNNO75324 88 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 PSMG1O95456 288 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 AP2A1O95782 977 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 SERPINB5P36952 375 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 GARSP41250 739 aaKnown RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 USP10Q14694 798 aaKnown RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 PAFAH1B3Q15102 231 aaKnown RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 WASHC2DQ5SRD0 308 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 MORN1Q5T089 497 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 C4orf22Q6V702 233 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 RIPOR1Q6ZS17 1223 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 RPS27LQ71UM5 84 aaKnown RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 PDZD4Q76G19 769 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 SCUBE1Q8IWY4 988 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 RNF148Q8N7C7 305 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 TTC16Q8NEE8 873 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 TRPV1Q8NER1 839 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 FBXO41Q8TF61 875 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 UCMAQ8WVF2 138 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 NT5C3BQ969T7 300 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 TAGLN3Q9UI15 199 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 PADI3Q9ULW8 664 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 C9IYK1 514 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 SOAT2O75908 522 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 GJA9P57773 515 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 KYAT3Q6YP21 454 aaKnown RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 KCTD4Q8WVF5 259 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 SCG3Q8WXD2 468 aaKnown RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 ZNF419Q96HQ0 510 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-221ENST00000469415 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 ADAM2Q99965 735 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 SLC7A8Q9UHI5 535 aa18.19■□□□□ 0.5
MCF2L-221ENST00000469415 ZCWPW2A0A1B0GU75 182 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms