RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PCDHA11Q9Y5I1 949 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 INSL5Q9Y5Q6 135 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 MAD1L1Q9Y6D9 718 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 ANKRD36A6QL64 1941 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 CEP290O15078 2479 aa9.56□□□□□ -0.88
SMC1A-205ENST00000469129 NUP210Q8TEM1 1887 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-205ENST00000469129 MATN3O15232 486 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 KRT37O76014 449 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 GJB5O95377 273 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 LATS1O95835 1130 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 FGBP02675 491 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 ACRP10323 421 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CCNB1P14635 433 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 BRAFP15056 766 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 TACR2P21452 398 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 PRKCHP24723 683 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 ITGB8P26012 769 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CNTFP26441 200 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 GCAP28676 217 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SERPINB9P50453 376 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SLC18A1P54219 525 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 YBEYP58557 167 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-205ENST00000469129 ZBTB17Q13105 803 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SPANXN3Q5MJ09 141 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SYCP2LQ5T4T6 812 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 TTC39BQ5VTQ0 682 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-205ENST00000469129 RAP1GAP2Q684P5 730 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CASC4Q6P4E1 433 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CYS1Q717R9 158 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 KLHDC8BQ8IXV7 354 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF683Q8IZ20 524 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 LRRN4Q8WUT4 740 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 DYDC1Q8WWB3 177 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SLC44A1Q8WWI5 657 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SGSM3Q96HU1 749 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SIGLEC10Q96LC7 697 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 RPRD1AQ96P16 312 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-205ENST00000469129 IL12RB2Q99665 862 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CEP41Q9BYV8 373 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 SLC39A8Q9C0K1 460 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 TRABDQ9H4I3 376 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 CCDC134Q9H6E4 229 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 RXFP1Q9HBX9 757 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 BFARQ9NZS9 450 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF180Q9UJW8 692 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 INSL6Q9Y581 213 aa9.55□□□□□ -0.88
SMC1A-205ENST00000469129 DNAH12Q6ZR08 3092 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 TMEM120BA0PK00 339 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 ZNF840PA6NDX5 716 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 FAM47DPA6NHR8 397 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 DRGXA6NNA5 263 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 PRPF4O43172 522 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 ACSL4O60488 711 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 MAFKO60675 156 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 RAMP2O60895 175 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 AVILO75366 819 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 KRT38O76015 456 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 FGF18O76093 207 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 SEC24AO95486 1093 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 JCHAINP01591 159 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 POLBP06746 335 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 ADH1AP07327 375 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 HMBSP08397 361 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 CTSAP10619 480 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 HMGA1P17096 107 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 CA8P35219 290 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 NPY2RP49146 381 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 RENBPP51606 427 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 TWF1Q12792 350 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 CDH17Q12864 832 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 HNRNPDQ14103 355 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 FRG1Q14331 258 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 KBTBD12Q3ZCT8 623 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 C5orf22Q49AR2 442 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 PABPC1LQ4VXU2 614 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 UNC5AQ6ZN44 842 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 MARK2Q7KZI7 788 aaKnown RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 OTOP2Q7RTS6 562 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 C14orf80Q86SX3 495 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 SLC26A11Q86WA9 606 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 LRRC6Q86X45 466 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 HERC6Q8IVU3 1022 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 CCDC117Q8IWD4 279 aaPredicted RBP9.54□□□□□ -0.88
SMC1A-205ENST00000469129 TP53INP2Q8IXH6 220 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 ELMOD1Q8N336 334 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 BBS5Q8N3I7 341 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 DNAAF3Q8N9W5 541 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 BCAS4Q8TDM0 211 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 DEPDC1BQ8WUY9 529 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 DCAKDQ8WVC6 231 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 MAML1Q92585 1016 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 PSMG2Q969U7 264 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 TTC17Q96AE7 1141 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 MTBPQ96DY7 904 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 AGAP3Q96P47 875 aa9.54□□□□□ -0.88
SMC1A-205ENST00000469129 GCNAQ96QF7 691 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms