RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CAPN12Q6ZSI9 719 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 CAND1Q86VP6 1230 aaKnown RBP19.41■□□□□ 0.7
SMC4-209ENST00000468653 ZNF354CQ86Y25 554 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 CFAP52Q8N1V2 620 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 ATP11CQ8NB49 1132 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 EPS8L3Q8TE67 593 aaKnown RBP19.41■□□□□ 0.7
SMC4-209ENST00000468653 HMCESQ96FZ2 354 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 TEKT5Q96M29 485 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 SLC22A12Q96S37 553 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 GBA3Q9H227 469 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 XAB2Q9HCS7 855 aaKnown RBP19.41■□□□□ 0.7
SMC4-209ENST00000468653 AGO1Q9UL18 857 aaKnown RBP19.41■□□□□ 0.7
SMC4-209ENST00000468653 ANAPC1Q9H1A4 1944 aa19.41■□□□□ 0.7
SMC4-209ENST00000468653 RAMP2O60895 175 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 NEBLO76041 1014 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 ELK3P41970 407 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 IFI35P80217 286 aaPredicted RBP19.4■□□□□ 0.7
SMC4-209ENST00000468653 STAT4Q14765 748 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 ANO4Q32M45 955 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 C5orf22Q49AR2 442 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 ADGRF1Q5T601 910 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 AGBL2Q5U5Z8 902 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 RTL10Q7L3V2 364 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 MAB21L3Q8N8X9 362 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 WBP2Q969T9 261 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 MAN1C1Q9NR34 630 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 CHMP2BQ9UQN3 213 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 PCDHA11Q9Y5I1 949 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 CPQQ9Y646 472 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 ZFP37Q9Y6Q3 630 aaPredicted RBP19.4■□□□□ 0.7
SMC4-209ENST00000468653 SHROOM3Q8TF72 1996 aa19.4■□□□□ 0.7
SMC4-209ENST00000468653 A0A1W2PRU2 124 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 TRDMT1O14717 391 aaKnown RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 OLFM2O95897 454 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 CKMP06732 381 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 IVLP07476 585 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 NFKB1P19838 968 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 CD68P34810 354 aaPredicted RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 PHBP35232 272 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 SLCO1A2P46721 670 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 GYS2P54840 703 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 CBLBQ13191 982 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 GPM6BQ13491 265 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 POLD3Q15054 466 aaPredicted RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 LONRF1Q17RB8 773 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 PDE12Q6L8Q7 609 aaKnown RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 SH2D3CQ8N5H7 860 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 FAM76AQ8TAV0 307 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 ZSCAN18Q8TBC5 510 aaPredicted RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 ZFRQ96KR1 1074 aaKnown RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 RETREG1Q9H6L5 497 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 ZNF212Q9UDV6 495 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 MYO18AQ92614 2054 aaKnown RBP19.39■□□□□ 0.7
SMC4-209ENST00000468653 DOCK4Q8N1I0 1966 aa19.39■□□□□ 0.7
SMC4-209ENST00000468653 RGS16O15492 202 aaPredicted RBP19.39■□□□□ 0.69
SMC4-209ENST00000468653 CLASP2O75122 1294 aaKnown RBP19.39■□□□□ 0.69
SMC4-209ENST00000468653 YBEYP58557 167 aaPredicted RBP19.39■□□□□ 0.69
SMC4-209ENST00000468653 ERVK-21P61565 698 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 PRPSAP1Q14558 356 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 PARP15Q460N3 678 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 C3orf62Q6ZUJ4 267 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 IL12RB2Q99665 862 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 WDR83Q9BRX9 315 aaKnown RBP19.39■□□□□ 0.69
SMC4-209ENST00000468653 SP110Q9HB58 689 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 TEX264Q9Y6I9 313 aa19.39■□□□□ 0.69
SMC4-209ENST00000468653 TRAV19A0A0A6YYK7 116 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 RFPL2O75678 378 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 LATS1O95835 1130 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 C1RP00736 705 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 GJA1P17302 382 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 SSTR1P30872 391 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 GRIA1P42261 906 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 CDH4P55283 916 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 GPX6P59796 221 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 RPS24P62847 133 aaKnown RBP19.38■□□□□ 0.69
SMC4-209ENST00000468653 ZNF534Q76KX8 674 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 CNTD1Q8N815 330 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 TTC16Q8NEE8 873 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 LRRC39Q96DD0 335 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 PGM2Q96G03 612 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 RBM22Q9NW64 420 aaKnown RBP eCLIP19.38■□□□□ 0.695e-24■■■■■ 66.5
SMC4-209ENST00000468653 NOVA2Q9UNW9 492 aaKnown RBP19.38■□□□□ 0.69
SMC4-209ENST00000468653 TTLL3Q9Y4R7 772 aa19.38■□□□□ 0.69
SMC4-209ENST00000468653 H3BNC9 293 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 TSPAN3O60637 253 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 TCEA3O75764 348 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 FGF19O95750 216 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 CPP00450 1065 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 MLNP12872 115 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 EPCAMP16422 314 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 TSHRP16473 764 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 MAGEA3P43357 314 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 LRRC8BQ6P9F7 803 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 IGDCC3Q8IVU1 814 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 NSMCE1Q8WV22 266 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 ABHD8Q96I13 439 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 PRICKLE1Q96MT3 831 aaPredicted RBP19.37■□□□□ 0.69
SMC4-209ENST00000468653 HCFC1R1Q9NWW0 138 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 LSM7Q9UK45 103 aaKnown RBP19.37■□□□□ 0.69
SMC4-209ENST00000468653 YBX2Q9Y2T7 364 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms