RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 CARNMT1Q8N4J0 409 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 EMC1Q8N766 993 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 JOSD2Q8TAC2 188 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 RXFP2Q8WXD0 754 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 RNF34Q969K3 372 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 MRRFQ96E11 262 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 VCPIP1Q96JH7 1222 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 CFAP57Q96MR6 1250 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 HAPLN3Q96S86 360 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ARRDC1-AS1Q9H2J1 176 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 ITM2CQ9NQX7 267 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 METTL5Q9NRN9 209 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 DLL3Q9NYJ7 618 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 USP36Q9P275 1121 aaKnown RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 BCCIPQ9P287 314 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 VANGL2Q9ULK5 521 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 TBC1D30Q9Y2I9 924 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 PAXBP1Q9Y5B6 917 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 OR51B4Q9Y5P0 310 aa11.49□□□□□ -0.57
COL4A6-205ENST00000468338 DNMT3AQ9Y6K1 912 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-205ENST00000468338 CHD5Q8TDI0 1954 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PRR5-ARHGAP8B1AHC4 643 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 H0Y626 953 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SYNCRIPO60506 623 aaKnown RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 CLDN11O75508 207 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 EPHX1P07099 455 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SRPRAP08240 638 aaKnown RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 KRT3P12035 628 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 GZMAP12544 262 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 HLA-EP13747 358 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 RFC1P35251 1148 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 MPLP40238 635 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SCTRP47872 440 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 OXCT1P55809 520 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 UBASH3AP57075 661 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 ARHGAP8P85298 464 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 NRG1Q02297 640 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 LMNB2Q03252 620 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 KCNC4Q03721 635 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PEAR1Q5VY43 1037 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 ACAD10Q6JQN1 1059 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PPP1R2P3Q6NXS1 205 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 WDR59Q6PJI9 974 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SLC36A4Q6YBV0 504 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PRR23CQ6ZRP0 262 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 STRADAQ7RTN6 431 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 CCDC117Q8IWD4 279 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 MCOLN2Q8IZK6 566 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 APCDD1Q8J025 514 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 OR52K2Q8NGK3 314 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 OR2T3Q8NH03 318 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 RPRD1AQ96P16 312 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 NUP58Q9BVL2 599 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SLC6A17Q9H1V8 727 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 FBRSQ9HAH7 460 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PRDM16Q9HAZ2 1276 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 PRSS16Q9NQE7 514 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF212Q9UDV6 495 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 SUN2Q9UH99 717 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 ITIH6Q6UXX5 1313 aa11.48□□□□□ -0.57
COL4A6-205ENST00000468338 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
COL4A6-205ENST00000468338 DMXL1Q9Y485 3027 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 KNL1Q8NG31 2342 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 A0A1W2PQJ5 194 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 CNTN5O94779 1100 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 GJB6O95452 261 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 TNFAIP3P21580 790 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 MZF1P28698 734 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 SDC4P31431 198 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ADRA1BP35368 520 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 CDH4P55283 916 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 HDAC4P56524 1084 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 TPM4P67936 248 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ATP11AP98196 1134 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 C15orf59Q2T9L4 293 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 HNRNPA1L2Q32P51 320 aaKnown RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 FNDC3BQ53EP0 1204 aaKnown RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 RAB6CQ53S08 254 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ALFQ53S48 1182 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 SFMBT2Q5VUG0 894 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 LPCAT2Q7L5N7 544 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF571Q7Z3V5 609 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 PHLDB2Q86SQ0 1253 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 CIR1Q86X95 450 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 FAM131BQ86XD5 332 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 SIPA1Q96FS4 1042 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF419Q96HQ0 510 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 FEM1AQ9BSK4 669 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 SIK2Q9H0K1 926 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 OSBPL2Q9H1P3 480 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms