RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PABPC3Q9H361 631 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CDC42EP4Q9H3Q1 356 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 TRPM5Q9NZQ8 1165 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 AGO1Q9UL18 857 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 SHOC2Q9UQ13 582 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 RWDD3Q9Y3V2 267 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 PCDHA11Q9Y5I1 949 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 N6AMT1Q9Y5N5 214 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 MYLKQ15746 1914 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 FGF10O15520 208 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 RFPL2O75678 378 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 RB1P06400 928 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 EPCAMP16422 314 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 MAGEA3P43357 314 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 TRPC1P48995 793 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF844Q08AG5 666 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CALCOCO2Q13137 446 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 SYCP2LQ5T4T6 812 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 FAXCQ5TGI0 409 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 RWDD4Q6NW29 188 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 HOOK3Q86VS8 718 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 IGDCC3Q8IVU1 814 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 KLHDC8BQ8IXV7 354 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 UMODL1-AS1Q8N2C9 162 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CNTD1Q8N815 330 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 TSGA13Q96PP4 275 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CDK5RAP1Q96SZ6 601 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 PLAAQ9Y263 795 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 ASB3Q9Y575 518 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 A0A0A0MRY4 1105 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 RNF103O00237 685 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 CACNG3O60359 315 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 C1RP00736 705 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 NUDT17P0C025 328 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 MYCLP1P12525 358 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-208ENST00000468300 TACR2P21452 398 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 ELF1P32519 619 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 CYP4F8P98187 520 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 AP1B1Q10567 949 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 PDK1Q15118 436 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 SLC5A9Q2M3M2 681 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 HSP90B2PQ58FF3 399 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 TTMPQ5BVD1 217 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 ALS2CLQ60I27 953 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 RFWD3Q6PCD5 774 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 LCA5Q86VQ0 697 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 ATP6V0D2Q8N8Y2 350 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 BBOF1Q8ND07 529 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 VN1R2Q8NFZ6 395 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 AZIN2Q96A70 460 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 SPATA13Q96N96 652 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 EMILIN2Q9BXX0 1053 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 IQCGQ9H095 443 aaKnown RBP8.46□□□□□ -1.05
BRCA1-208ENST00000468300 NINJ2Q9NZG7 142 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 PAK5Q9P286 719 aa8.46□□□□□ -1.05
BRCA1-208ENST00000468300 DNMT3BQ9UBC3 853 aaKnown RBP8.46□□□□□ -1.05
BRCA1-208ENST00000468300 GOLGA8MH3BSY2 632 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 KCNK1O00180 336 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 PER2O15055 1255 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 CHADO15335 359 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 CCL16O15467 120 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 ACSL4O60488 711 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 AVILO75366 819 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 GLUD1P00367 558 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 RHOQP17081 205 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 GJA1P17302 382 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 GRIA1P42261 906 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 MAGEA8P43361 318 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 SEMA5AQ13591 1074 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 SLC29A2Q14542 456 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 IHHQ14623 411 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 VEPH1Q14D04 833 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 FAM217AQ8IXS0 508 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 ARL14EPQ8N8R7 260 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 TCEAL4Q96EI5 215 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 YIPF2Q9BWQ6 316 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 ZYG11BQ9C0D3 744 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 MAN1C1Q9NR34 630 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 UXTQ9UBK9 157 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 APOEP02649 317 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 CORO1AP31146 461 aaKnown RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 PAPOLAP51003 745 aaKnown RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 KPNA1P52294 538 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 GPX6P59796 221 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 PRSS36Q5K4E3 855 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 NUGGCQ68CJ6 796 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 KCTD11Q693B1 232 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 HEATR6Q6AI08 1181 aaKnown RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 BZW1Q7L1Q6 419 aaKnown RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 DENND1CQ8IV53 801 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 ARL8AQ96BM9 186 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 ZNF707Q96C28 371 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 LRRC45Q96CN5 670 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 RBM15Q96T37 977 aaKnown RBP eCLIP8.46□□□□□ -1.06
BRCA1-208ENST00000468300 SLC46A2Q9BY10 475 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 RAB6BQ9NRW1 208 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms