RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CSF2P04141 144 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 PRKAR1AP10644 381 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 AKT2P31751 481 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 ESRP1Q6NXG1 681 aaKnown RBP12.09□□□□□ -0.47
VPS26A-204ENST00000467852 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 TMPRSS9Q7Z410 1059 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 SLC35F3Q8IY50 421 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 CCDC13Q8IYE1 715 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 IGSF22Q8N9C0 903 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 FAM174AQ8TBP5 190 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 LMX1AQ8TE12 382 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 TMA16Q96EY4 203 aaKnown RBP12.09□□□□□ -0.47
VPS26A-204ENST00000467852 MYO19Q96H55 970 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 HAPLN3Q96S86 360 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 SLC29A3Q9BZD2 475 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 PARVGQ9HBI0 331 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 KRT82Q9NSB4 513 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 GGT7Q9UJ14 662 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 NAGPAQ9UK23 515 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 SLC5A6Q9Y289 635 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 MAP4K5Q9Y4K4 846 aa12.09□□□□□ -0.47
VPS26A-204ENST00000467852 TNNC2P02585 160 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 C4BPAP04003 597 aaKnown RBP12.08□□□□□ -0.48
VPS26A-204ENST00000467852 ASLP04424 464 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 NME1P15531 152 aaKnown RBP12.08□□□□□ -0.48
VPS26A-204ENST00000467852 ITGB7P26010 798 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 DRD3P35462 400 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 SLC12A3P55017 1021 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 ZNF445P59923 1031 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 CCL7P80098 99 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 CDC20Q12834 499 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 MRPL49Q13405 166 aaKnown RBP12.08□□□□□ -0.48
VPS26A-204ENST00000467852 TRIM29Q14134 588 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 Q6ZSR6 202 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 RUFY3Q7L099 469 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 FAM217AQ8IXS0 508 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 SLC22A18ASQ8N1D0 253 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 STK40Q8N2I9 435 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 KCTD17Q8N5Z5 321 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 KDM1BQ8NB78 822 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 SLC45A3Q96JT2 553 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 CGRRF1Q99675 332 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 NMUR1Q9HB89 426 aa12.08□□□□□ -0.48
VPS26A-204ENST00000467852 AKAP7Q9P0M2 348 aaPredicted RBP12.08□□□□□ -0.48
VPS26A-204ENST00000467852 DIDO1Q9BTC0 2240 aaKnown RBP12.08□□□□□ -0.48
VPS26A-204ENST00000467852 PP2D1A8MPX8 630 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 TCP11X1B4DZS4 312 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 K7EM74 188 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 DTNBO60941 627 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 RPLP0P05388 317 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 PLA2G4BP0C869 781 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 PRLRP16471 622 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 HNRNPA2B1P22626 353 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 MZF1P28698 734 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 LEPRP48357 1165 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 MAP3K7CLP57077 242 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 TNNC1P63316 161 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 EFEMP1Q12805 493 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 SP5Q6BEB4 398 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 PAQR9Q6ZVX9 377 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 PTAR1Q7Z6K3 402 aaPredicted RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 CACNA2D3Q8IZS8 1091 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 ZMIZ2Q8NF64 920 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 KLK6Q92876 244 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 TTC17Q96AE7 1141 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 SMOQ99835 787 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 CPEB1Q9BZB8 566 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 INTS2Q9H0H0 1204 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 ZHX3Q9H4I2 956 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 PDE11AQ9HCR9 933 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 INTS13Q9NVM9 706 aa12.07□□□□□ -0.48
VPS26A-204ENST00000467852 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
VPS26A-204ENST00000467852 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
VPS26A-204ENST00000467852 HEATR9A2RTY3 570 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 VWA3AA6NCI4 1184 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 A6NNZ2 444 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 TTC34A8MYJ7 566 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 DUX1O43812 170 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 BEST1O76090 585 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 JUNDP17535 347 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 CD70P32970 193 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 CLDN2P57739 230 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 MC1RQ01726 317 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 FZD2Q14332 565 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 ARSHQ5FYA8 562 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 ABI3BPQ7Z7G0 1075 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 PARGQ86W56 976 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 SDR16C5Q8N3Y7 309 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 ZNF557Q8N988 423 aaPredicted RBP12.06□□□□□ -0.48
VPS26A-204ENST00000467852 NOC3LQ8WTT2 800 aaKnown RBP12.06□□□□□ -0.48
VPS26A-204ENST00000467852 BTN2A2Q8WVV5 523 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 TNIP3Q96KP6 325 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 LURAP1Q96LR2 239 aa12.06□□□□□ -0.48
VPS26A-204ENST00000467852 NOX5Q96PH1 765 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms