RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RPS9P46781 194 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 MRPS21P82921 87 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 FZD5Q13467 585 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 PAFAH1B3Q15102 231 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 HSF5Q4G112 596 aaPredicted RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 AFMIDQ63HM1 303 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 TMEM215Q68D42 235 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 MBLAC2Q68D91 279 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 CWF19L1Q69YN2 538 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 SLC9A4Q6AI14 798 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 SPOCD1Q6ZMY3 1216 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 DCAF4L2Q8NA75 395 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 ACDQ96AP0 544 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 IER2Q9BTL4 223 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 C2orf49Q9BVC5 232 aaPredicted RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 ACE2Q9BYF1 805 aaPredicted RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 FOXQ1Q9C009 403 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 MUC3BQ9H195 1237 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 NOL6Q9H6R4 1146 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 LRRC19Q9H756 370 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 ELOVL2Q9NXB9 296 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 PACSIN2Q9UNF0 486 aaPredicted RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 JRKLQ9Y4A0 524 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 hCG_1818297A0A087WSY0 165 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 ATP5BP06576 529 aaKnown RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 ZFXP17010 805 aaPredicted RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 AOC1P19801 751 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 KIR2DL1P43626 348 aaPredicted RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 CLCN5P51795 746 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 TFDP2Q14188 446 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 RPS6KA1Q15418 735 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 NCBP2-AS2Q69YL0 99 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 APCDD1Q8J025 514 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 PQLC3Q8N755 202 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 KDM1BQ8NB78 822 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 FLCNQ8NFG4 579 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 TLR10Q9BXR5 811 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 MAK16Q9BXY0 300 aaKnown RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 EPHX3Q9H6B9 360 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 LMAN1LQ9HAT1 526 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 ETNK2Q9NVF9 386 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 VPS28Q9UK41 221 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 ZKSCAN5Q9Y2L8 839 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 SIT1Q9Y3P8 196 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 MTF2Q9Y483 593 aaPredicted RBP16.39■□□□□ 0.21
GPC1-207ENST00000466624 ATG2BQ96BY7 2078 aa16.39■□□□□ 0.21
GPC1-207ENST00000466624 A0A0D9SEW6 157 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 CHURC1-FNTBB4DL54 471 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 RASA4BC9J798 803 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 STK25O00506 426 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 RASA4O43374 803 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 PDGFBP01127 241 aaPredicted RBP16.38■□□□□ 0.21
GPC1-207ENST00000466624 SRPRAP08240 638 aaKnown RBP16.38■□□□□ 0.21
GPC1-207ENST00000466624 DLDP09622 509 aaKnown RBP16.38■□□□□ 0.21
GPC1-207ENST00000466624 ZNF569Q5MCW4 686 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 TRMT11Q7Z4G4 463 aaKnown RBP16.38■□□□□ 0.21
GPC1-207ENST00000466624 LRRC49Q8IUZ0 686 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 CCDC50Q8IVM0 306 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 SFTPA1Q8IWL2 248 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 ARHGAP12Q8IWW6 846 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 NPWQ8N729 165 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 OR7D4Q8NG98 312 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
GPC1-207ENST00000466624 PSMB7Q99436 277 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 CIPCQ9C0C6 399 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 CARD9Q9H257 536 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 ATP13A1Q9HD20 1204 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 THAP10Q9P2Z0 257 aaPredicted RBP16.38■□□□□ 0.21
GPC1-207ENST00000466624 RAD54BQ9Y620 910 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 CKAP5Q14008 2032 aa16.38■□□□□ 0.21
GPC1-207ENST00000466624 ZSCAN5CA6NGD5 496 aaPredicted RBP16.37■□□□□ 0.21
GPC1-207ENST00000466624 ARHGAP42A6NI28 874 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 APOL1O14791 398 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 RNF40O75150 1001 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 PYGMP11217 842 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 ECT2LQ008S8 904 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 SERINC3Q13530 473 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 ENPP2Q13822 863 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 DCAF12L1Q5VU92 463 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 RFX6Q8HWS3 928 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 SLC35F6Q8N357 371 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 PLD5Q8N7P1 536 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
GPC1-207ENST00000466624 USP33Q8TEY7 942 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 PBXIP1Q96AQ6 731 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 OSBPL8Q9BZF1 889 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 SLC39A8Q9C0K1 460 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 CHRDQ9H2X0 955 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 RBM12Q9NTZ6 932 aaKnown RBP16.37■□□□□ 0.21
GPC1-207ENST00000466624 DLGAP2Q9P1A6 1054 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 VPS51Q9UID3 782 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 HCN2Q9UL51 889 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 HPCAL4Q9UM19 191 aa16.37■□□□□ 0.21
GPC1-207ENST00000466624 KDELR3O43731 214 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms