RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 BYSLQ13895 437 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 SIM2Q14190 667 aaPredicted RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 PLK5Q496M5 336 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 USP39Q53GS9 565 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 BOLA3Q53S33 107 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 SPDYCQ5MJ68 293 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 ERMARDQ5T6L9 678 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 C9orf64Q5T6V5 341 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 RNF219Q5W0B1 726 aaPredicted RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 LAIR1Q6GTX8 287 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 SCYL2Q6P3W7 929 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 TFAP2DQ7Z6R9 452 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 CCDC170Q8IYT3 715 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 ABCA7Q8IZY2 2146 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 PYROXD2Q8N2H3 581 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 RTL3Q8N8U3 475 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 OR2T3Q8NH03 318 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 ZNF564Q8TBZ8 553 aaPredicted RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 FAM71BQ8TC56 605 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 FRS2Q8WU20 508 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 TEKT4Q8WW24 435 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 HMGB4Q8WW32 186 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 LOXL4Q96JB6 756 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 EPAS1Q99814 870 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 SNRNP25Q9BV90 132 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 PACSIN1Q9BY11 444 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 TPSD1Q9BZJ3 242 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 MKRN2Q9H000 416 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 PRSS16Q9NQE7 514 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 USP36Q9P275 1121 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 SLCO3A1Q9UIG8 710 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 ANAPC7Q9UJX3 599 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 USP18Q9UMW8 372 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 AP4E1Q9UPM8 1137 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 FAM186AA6NE01 2351 aa9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 RIF1Q5UIP0 2472 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-208ENST00000466579 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.85
SDCCAG3-208ENST00000466579 A0A0D9SEW6 157 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 EDDM13A0A1B0GTR0 161 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 C10orf142B7Z368 130 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 MYO1FO00160 1098 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 FGF10O15520 208 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 PRPSAP2O60256 369 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 GFRA3O60609 400 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF217O75362 1048 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 PROSCO94903 275 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 MAN1A1P33908 653 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ETFBP38117 255 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 STK19P49842 368 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ST8SIA6P61647 398 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 KRT83P78385 493 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC25A11Q02978 314 aaKnown RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 GNA12Q03113 381 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZBTB16Q05516 673 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 DPYSL2Q16555 572 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 CA9Q16790 459 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 KBTBD6Q86V97 674 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 TMPRSS6Q8IU80 811 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 UMODL1-AS1Q8N2C9 162 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 SH2D3CQ8N5H7 860 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 FAM160A2Q8N612 972 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 CTNNBL1Q8WYA6 563 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 PTPRN2Q92932 1015 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ARHGEF2Q92974 986 aaKnown RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 BTBD6Q96KE9 485 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 KCTD15Q96SI1 283 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 C2orf49Q9BVC5 232 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 DUSP15Q9H1R2 295 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 RSPH9Q9H1X1 276 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 MAGEH1Q9H213 219 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 NOL6Q9H6R4 1146 aaKnown RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 PRDM16Q9HAZ2 1276 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ITM2CQ9NQX7 267 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 SPTLC3Q9NUV7 552 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 NDFIP2Q9NV92 336 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 IMPACTQ9P2X3 320 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 VPS51Q9UID3 782 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 MBD1Q9UIS9 605 aaPredicted RBP9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 VPS28Q9UK41 221 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 CEP192Q8TEP8 1941 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 THADAQ6YHU6 1953 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF292O60281 2723 aa9.71□□□□□ -0.86
SDCCAG3-208ENST00000466579 WDR87Q6ZQQ6 2873 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 NUP205Q92621 2012 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 IGHV1OR15-9A0A0B4J2B8 117 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 TTC34A8MYJ7 566 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZBTB24O43167 697 aaPredicted RBP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SNAP91O60641 907 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 LRP3O75074 770 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SIN3BO75182 1162 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 EPN2O95208 641 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 CD160O95971 181 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RETP07949 1114 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SRCP12931 536 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 TCF4P15884 667 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 BCKDHBP21953 392 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 TGM1P22735 817 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 EPHB2P29323 1055 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms