RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GRID2IPA4D2P6 1211 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 E2F3O00716 465 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 DLX3O60479 287 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 TSPAN1O60635 241 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 TIE1P35590 1138 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 PDX1P52945 283 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 MAD2L1Q13257 205 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 RFTN1Q14699 578 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GLT6D1Q7Z4J2 308 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 CRLF3Q8IUI8 442 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 HORMAD2Q8N7B1 307 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 RHBDD1Q8TEB9 315 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 DNASE1L2Q92874 299 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 NCLNQ969V3 563 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 VPS33AQ96AX1 596 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 Q9H521 79 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 CHORDC1Q9UHD1 332 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 NALCNQ8IZF0 1738 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 A0A087WUV0 522 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 FAM170BA6NMN3 283 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 UBXN7O94888 489 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 ENDOD1O94919 500 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 CFHP08603 1231 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GRK2P25098 689 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 NTSP30990 170 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 ZNF132P52740 706 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 FOXM1Q08050 763 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 DHX34Q14147 1143 aaKnown RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 EPC2Q52LR7 807 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GRASPQ7Z6J2 395 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 CYP4X1Q8N118 509 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 ARL14Q8N4G2 192 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 ATXN2LQ8WWM7 1075 aaKnown RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 ARHGEF3Q9NR81 526 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 PCDHGC5Q9Y5F6 944 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 PAPPAQ13219 1627 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 NPHP3-ACAD11A0A0J9YXS1 232 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 KCNA1Q09470 495 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 GPR17Q13304 367 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 HIC1Q14526 733 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 CYP20A1Q6UW02 462 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 SAMD14Q8IZD0 417 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 FERD3LQ96RJ6 166 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 NXF3Q9H4D5 531 aaKnown RBP9.63□□□□□ -0.87
SCAF11-205ENST00000465950 RMND5AQ9H871 391 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 DNAJC28Q9NX36 388 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 SERTAD3Q9UJW9 196 aa9.63□□□□□ -0.87
SCAF11-205ENST00000465950 EVPLLA8MZ36 301 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 LATS1O95835 1130 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 SFTPCP11686 197 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 MATKP42679 507 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ANO7Q6IWH7 933 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CACUL1Q86Y37 369 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ADSSL1Q8N142 457 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 TMEM74Q96NL1 305 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 C20orf96Q9NUD7 363 aaPredicted RBP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 FAM86B1E9PN63 330 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 HNRNPRO43390 633 aaKnown RBP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ZNF623O75123 536 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 FAM86B2P0C5J1 330 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 TMEM253P0C7T8 217 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 SNHG28P0DPA3 235 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 GLULP15104 373 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 MRPS21P82921 87 aaKnown RBP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 USP10Q14694 798 aaKnown RBP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 RAP1GAP2Q684P5 730 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CDK20Q8IZL9 346 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 EDEM1Q92611 657 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ZDHHC12Q96GR4 267 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 SNX27Q96L92 541 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CACNA2D2Q9NY47 1150 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 TRAF3IP3Q9Y228 551 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 RBP1P09455 135 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 MASP1P48740 699 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 PSMD4P55036 377 aaKnown RBP9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ANTXR2P58335 489 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CDH17Q12864 832 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ART3Q13508 389 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 FAM187BQ17R55 369 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 DEFB106AQ8N104 65 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CYTH2Q99418 400 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 PRRG3Q9BZD7 231 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 TKTL2Q9H0I9 626 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 DPH5Q9H2P9 285 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 ARL15Q9NXU5 204 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 A0A087WWV3 80 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 MORF4L2Q15014 288 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 TAGAPQ8N103 731 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 TMCO5AQ8N6Q1 288 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 C10orf53Q8N6V4 93 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 SNF8Q96H20 258 aa9.62□□□□□ -0.87
SCAF11-205ENST00000465950 CLSTN3Q9BQT9 956 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms