RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3KA0A087X1G2 549 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3FA6NER0 549 aaPredicted RBP13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3LB9A6J9 549 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 GOLGA6L22H0YM25 854 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TAF4O00268 1085 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 ATP9BO43861 1147 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
SRM-203ENST00000465788 DAB1O75553 588 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3HP0C7X1 549 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 NOS2P35228 1153 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 KRT83P78385 493 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 BRMS1LQ5PSV4 323 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 TBC1D3Q8IZP1 549 aaPredicted RBP13.19□□□□□ -0.3
SRM-203ENST00000465788 AADATQ8N5Z0 425 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 MFSD2AQ8NA29 543 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 MLKLQ8NB16 471 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
SRM-203ENST00000465788 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 RPL10LQ96L21 214 aaKnown RBP13.19□□□□□ -0.3
SRM-203ENST00000465788 CPXM1Q96SM3 734 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
SRM-203ENST00000465788 A0A1W2PR77 199 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 GOLGA8CPA6NN73 597 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 BECN2A8MW95 431 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 TLR4O00206 839 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 ENC1O14682 589 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 MCF2LO15068 1137 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 PLRG1O43660 514 aaKnown RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 LDOC1O95751 146 aaPredicted RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 F9P00740 461 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 ZNF18P17022 549 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 SCNN1AP37088 669 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 RXRGP48443 463 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 STK19P49842 368 aaPredicted RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 CDH4P55283 916 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 NXPH1P58417 271 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 ILKQ13418 452 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 AUHQ13825 339 aaKnown RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 TPD52L1Q16890 204 aaPredicted RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 C5orf22Q49AR2 442 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 ACCSLQ4AC99 568 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 SETMARQ53H47 684 aaPredicted RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 KCNT1Q5JUK3 1230 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 OR6B2Q6IFH4 312 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 CXorf57Q6NSI4 855 aaKnown RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 FBXL22Q6P050 247 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 NEK5Q6P3R8 708 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 LAYNQ6UX15 382 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 MSANTD4Q8NCY6 345 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 SAP25Q8TEE9 199 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 FRS2Q8WU20 508 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 FEM1AQ9BSK4 669 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 C2orf49Q9BVC5 232 aaPredicted RBP13.18□□□□□ -0.3
SRM-203ENST00000465788 PREBQ9HCU5 417 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 VPS28Q9UK41 221 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 TBC1D30Q9Y2I9 924 aa13.18□□□□□ -0.3
SRM-203ENST00000465788 ARID1BQ8NFD5 2236 aaPredicted RBP13.17□□□□□ -0.3
SRM-203ENST00000465788 SYNJ2BP-COX16A0A087WUM0 186 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 TRABD2BA6NFA1 517 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 KCNK3O14649 394 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 RFPL3O75679 317 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 WNT1P04628 370 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 SLC9A1P19634 815 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 PON1P27169 355 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 EPHA8P29322 1005 aaPredicted RBP13.17□□□□□ -0.3
SRM-203ENST00000465788 DRD3P35462 400 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 UBE2HP62256 183 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 NME3Q13232 169 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 STAT4Q14765 748 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 DLG2Q15700 870 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 OLFML1Q6UWY5 402 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 LRRC31Q6UY01 552 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.17□□□□□ -0.3
SRM-203ENST00000465788 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 FAM174AQ8TBP5 190 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 MDM1Q8TC05 714 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 NXPE2Q96DL1 559 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
SRM-203ENST00000465788 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 COX16Q9P0S2 106 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 RALYQ9UKM9 306 aaKnown RBP13.17□□□□□ -0.3
SRM-203ENST00000465788 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 HS3ST2Q9Y278 367 aa13.17□□□□□ -0.3
SRM-203ENST00000465788 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
SRM-203ENST00000465788 PRAMEF26H0Y7S4 382 aa13.16□□□□□ -0.3
SRM-203ENST00000465788 M0QYT0 321 aa13.16□□□□□ -0.3
SRM-203ENST00000465788 CLCN6P51797 869 aa13.16□□□□□ -0.3
SRM-203ENST00000465788 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms