RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 SHKBP1Q8TBC3 707 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 P3H4Q92791 437 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 ZNF775Q96BV0 537 aaPredicted RBP9.07□□□□□ -0.96
UBA3-208ENST00000465627 PLD4Q96BZ4 506 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 P2RY11Q96G91 374 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 QKIQ96PU8 341 aaKnown RBP eCLIP9.07□□□□□ -0.961e-6■■■■□ 23.1
UBA3-208ENST00000465627 ADAM7Q9H2U9 754 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 NOL6Q9H6R4 1146 aaKnown RBP9.07□□□□□ -0.96
UBA3-208ENST00000465627 C10orf88Q9H8K7 445 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 ZDHHC7Q9NXF8 308 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 DNMT3BQ9UBC3 853 aaKnown RBP9.07□□□□□ -0.96
UBA3-208ENST00000465627 RASAL2Q9UJF2 1139 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 RAD54BQ9Y620 910 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 HECTD1Q9ULT8 2610 aa9.07□□□□□ -0.96
UBA3-208ENST00000465627 NUP210Q8TEM1 1887 aaPredicted RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 KIF26AQ9ULI4 1882 aaPredicted RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 PER2O15055 1255 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 CCL16O15467 120 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 DAPK3O43293 454 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 MBTPS2O43462 519 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 ECEL1O95672 775 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 LATS1O95835 1130 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 GLP2RO95838 553 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 VAV1P15498 845 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 SLC6A4P31645 630 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 COG7P83436 770 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 RBM10P98175 930 aaKnown RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 GALNT2Q10471 571 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 CBLBQ13191 982 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 CUL1Q13616 776 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 SLC5A9Q2M3M2 681 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 ODF2Q5BJF6 829 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 SLC45A4Q5BKX6 768 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 NUGGCQ68CJ6 796 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 TXNDC8Q6A555 127 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 FBXL22Q6P050 247 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 C1orf228Q6PIY5 440 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 PRUNE1Q86TP1 453 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 IFT20Q8IY31 132 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 RTL3Q8N8U3 475 aaKnown RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 ATP6V0D2Q8N8Y2 350 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 GRK7Q8WTQ7 553 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.96
UBA3-208ENST00000465627 IGSF8Q969P0 613 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 TBC1D31Q96DN5 1066 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 MRPL38Q96DV4 380 aaKnown RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 TCEAL4Q96EI5 215 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 CYP2S1Q96SQ9 504 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 TMEM121Q9BTD3 319 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 MAK16Q9BXY0 300 aaKnown RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 SLC46A2Q9BY10 475 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 TXLNGYQ9BZA5 131 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 SLC6A16Q9GZN6 736 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 PCDH9Q9HC56 1237 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 GKN1Q9NS71 199 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 NDFIP2Q9NV92 336 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 ZNF446Q9NWS9 450 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 FEZ2Q9UHY8 353 aaPredicted RBP9.06□□□□□ -0.96
UBA3-208ENST00000465627 MYO10Q9HD67 2058 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 CLUHO75153 1309 aa9.06□□□□□ -0.96
UBA3-208ENST00000465627 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 A0A1W2PRU2 124 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 HACD1B0YJ81 288 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 MCF2LO15068 1137 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 FGF10O15520 208 aaPredicted RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 ACSL4O60488 711 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 SEC31AO94979 1220 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 LMNAP02545 664 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 APOEP02649 317 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 FAM153BP0C7A2 387 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 ZSCAN5DPP0CG00 497 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 ETS1P14921 441 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 RHOQP17081 205 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 PTPN2P17706 415 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 MCM3P25205 808 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 RBL1P28749 1068 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 EPHB2P29323 1055 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 CDC25CP30307 473 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 STIP1P31948 543 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 MAGEA6P43360 314 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 NRLP54845 237 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 CYP4F8P98187 520 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 LMNB2Q03252 620 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 DLX2Q07687 328 aaPredicted RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 FAM153CQ494X1 144 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 ALFQ53S48 1182 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 STXBP5Q5T5C0 1151 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 CCDC70Q6NSX1 233 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 TMCO3Q6UWJ1 677 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 KLHDC8BQ8IXV7 354 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 GSPT2Q8IYD1 628 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 UMODL1-AS1Q8N2C9 162 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 ARL14EPQ8N8R7 260 aaPredicted RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 RIN3Q8TB24 985 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 MICAL1Q8TDZ2 1067 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 ART4Q93070 314 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 CAVIN3Q969G5 261 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms