RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 VPS28Q9UK41 221 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 A0A0A6YYK5 440 aaPredicted RBP20.84■□□□□ 0.93
SKA3-205ENST00000465471 HLA-EP13747 358 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 GABRG2P18507 467 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 HCAR3P49019 387 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 PXNP49023 591 aaPredicted RBP20.84■□□□□ 0.93
SKA3-205ENST00000465471 TPI1P60174 286 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 GNA12Q03113 381 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 CAMK2GQ13555 558 aaPredicted RBP20.84■□□□□ 0.93
SKA3-205ENST00000465471 SMTNL2Q2TAL5 461 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 KCNT1Q5JUK3 1230 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 ANO7Q6IWH7 933 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 FAM71BQ8TC56 605 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 NOL6Q9H6R4 1146 aaKnown RBP20.84■□□□□ 0.93
SKA3-205ENST00000465471 CATSPERBQ9H7T0 1116 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 ZWILCHQ9H900 591 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 LUC7LQ9NQ29 371 aaKnown RBP20.84■□□□□ 0.93
SKA3-205ENST00000465471 FAM86C1Q9NVL1 165 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 TFR2Q9UP52 801 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 R4GN57 208 aa20.84■□□□□ 0.93
SKA3-205ENST00000465471 CXorf51AA0A1B0GTR3 108 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 RCCD1A6NED2 376 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 PROB1E7EW31 1015 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 EEF2KO00418 725 aaKnown RBP20.83■□□□□ 0.93
SKA3-205ENST00000465471 AXIN1O15169 862 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 ZMPSTE24O75844 475 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 ALDH1A2O94788 518 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 EPHX1P07099 455 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 GOT1P17174 413 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 STK19P49842 368 aaPredicted RBP20.83■□□□□ 0.93
SKA3-205ENST00000465471 COPAP53621 1224 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 TAS2R40P59535 323 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 STARD3Q14849 445 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 HNRNPA1L2Q32P51 320 aaKnown RBP20.83■□□□□ 0.93
SKA3-205ENST00000465471 HEATR6Q6AI08 1181 aaKnown RBP20.83■□□□□ 0.93
SKA3-205ENST00000465471 RFX8Q6ZV50 586 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 OR7D4Q8NG98 312 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 C2orf49Q9BVC5 232 aaPredicted RBP20.83■□□□□ 0.93
SKA3-205ENST00000465471 ACE2Q9BYF1 805 aaPredicted RBP20.83■□□□□ 0.93
SKA3-205ENST00000465471 MAGEH1Q9H213 219 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.83■□□□□ 0.93
SKA3-205ENST00000465471 DNAI1Q9UI46 699 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 VPS51Q9UID3 782 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 SLCO3A1Q9UIG8 710 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 HS3ST2Q9Y278 367 aa20.83■□□□□ 0.93
SKA3-205ENST00000465471 USP34Q70CQ2 3546 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 SNAP91O60641 907 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 NDUFV2P19404 249 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 CNR2P34972 360 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ETFBP38117 255 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 NUMBP49757 651 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ARSEP51690 589 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ST8SIA6P61647 398 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 KRT83P78385 493 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 DPYSQ14117 519 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 MESDQ14696 234 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 HADHQ16836 314 aaKnown RBP20.82■□□□□ 0.92
SKA3-205ENST00000465471 POLNQ7Z5Q5 900 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 UMODL1-AS1Q8N2C9 162 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ZNF366Q8N895 744 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ACRBPQ8NEB7 543 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ATRIPQ8WXE1 791 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 TSC1Q92574 1164 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 ARHGEF2Q92974 986 aaKnown RBP20.82■□□□□ 0.92
SKA3-205ENST00000465471 RPL10LQ96L21 214 aaKnown RBP20.82■□□□□ 0.92
SKA3-205ENST00000465471 PCDH18Q9HCL0 1135 aa20.82■□□□□ 0.92
SKA3-205ENST00000465471 CWC15Q9P013 229 aaKnown RBP20.82■□□□□ 0.92
SKA3-205ENST00000465471 BTNL10A8MVZ5 291 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 PJA2O43164 708 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 ATP9BO43861 1147 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 RAMP2O60895 175 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 IPO7O95373 1038 aaKnown RBP20.81■□□□□ 0.92
SKA3-205ENST00000465471 VAV2P52735 878 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 PPP6R3Q5H9R7 873 aaPredicted RBP20.81■□□□□ 0.92
SKA3-205ENST00000465471 FRS2Q8WU20 508 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 HMGB4Q8WW32 186 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 HSPH1Q92598 858 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 MRGPRX1Q96LB2 322 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 MKRN2Q9H000 416 aaKnown RBP20.81■□□□□ 0.92
SKA3-205ENST00000465471 KLC2Q9H0B6 622 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 FBRSQ9HAH7 460 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 ATP13A1Q9HD20 1204 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 PRSS16Q9NQE7 514 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 SUN2Q9UH99 717 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 SLC25A13Q9UJS0 675 aa20.81■□□□□ 0.92
SKA3-205ENST00000465471 TTC34A8MYJ7 566 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 HRO43593 1189 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 SYNCRIPO60506 623 aaKnown RBP20.8■□□□□ 0.92
SKA3-205ENST00000465471 ERCC2P18074 760 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 GLDCP23378 1020 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 ACVRL1P37023 503 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 YBEYP58557 167 aaPredicted RBP20.8■□□□□ 0.92
SKA3-205ENST00000465471 ARF5P84085 180 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 AFMIDQ63HM1 303 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 SH2D3CQ8N5H7 860 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 GAB3Q8WWW8 586 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 CSPG4P5Q96PW8 444 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 PHOX2BQ99453 314 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 TPSD1Q9BZJ3 242 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 LACRTQ9GZZ8 138 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms