RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 PAPOLAP51003 745 aaKnown RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 YBEYP58557 167 aaPredicted RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 GNA12Q03113 381 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 GAD2Q05329 585 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 AP1B1Q10567 949 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 OASLQ15646 514 aaKnown RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 PARP15Q460N3 678 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 SLC45A4Q5BKX6 768 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 RNF219Q5W0B1 726 aaPredicted RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 TFB1MQ8WVM0 346 aaKnown RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 ARHGEF2Q92974 986 aaKnown RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 HDAC11Q96DB2 347 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 HMCESQ96FZ2 354 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 MUC3BQ9H195 1237 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 MAGEH1Q9H213 219 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 ECT2Q9H8V3 914 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 LIMD1Q9UGP4 676 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 AMACRQ9UHK6 382 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 OTOL1A6NHN0 477 aaPredicted RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 ARHGAP42A6NI28 874 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 HACD1B0YJ81 288 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 HOXC11O43248 304 aaPredicted RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 ITGAVP06756 1048 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 ACVRL1P37023 503 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 RUNX3Q13761 415 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 KCTD19Q17RG1 926 aaPredicted RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 ARHGAP36Q6ZRI8 547 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 CDKL3Q8IVW4 592 aaPredicted RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 CPA6Q8N4T0 437 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 NAT16Q8N8M0 369 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 OR7D4Q8NG98 312 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 ATL2Q8NHH9 583 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 RUNDC3BQ96NL0 473 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 QKIQ96PU8 341 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■■□□ 16.5
ATF3-208ENST00000465155 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 PCYOX1Q9UHG3 505 aa13.72□□□□□ -0.21
ATF3-208ENST00000465155 DRG1Q9Y295 367 aaKnown RBP13.72□□□□□ -0.21
ATF3-208ENST00000465155 MIA3Q5JRA6 1907 aa13.71□□□□□ -0.21
ATF3-208ENST00000465155 TICRRQ7Z2Z1 1910 aa13.71□□□□□ -0.21
ATF3-208ENST00000465155 BCLAF3A2AJT9 711 aaKnown RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 SGK1O00141 431 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 MZF1P28698 734 aaPredicted RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 RBL1P28749 1068 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 CSKP41240 450 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 MRPS25P82663 173 aaKnown RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 LMNB2Q03252 620 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 LMAN2Q12907 356 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 NR1H3Q13133 447 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 SERINC3Q13530 473 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 AAK1Q2M2I8 961 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 HEATR6Q6AI08 1181 aaKnown RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 IL31Q6EBC2 164 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 ZNF783Q6ZMS7 281 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 TTC8Q8TAM2 541 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 GRK7Q8WTQ7 553 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 SPON2Q9BUD6 331 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 BRD8Q9H0E9 1235 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 BRD9Q9H8M2 597 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 KCNK12Q9HB15 430 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 ATP13A1Q9HD20 1204 aa13.71□□□□□ -0.22
ATF3-208ENST00000465155 KIAA1522Q9P206 1035 aaPredicted RBP13.71□□□□□ -0.22
ATF3-208ENST00000465155 KCNN4O15554 427 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 RAD51CO43502 376 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 CACNG3O60359 315 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 MAFKO60675 156 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 ECEL1O95672 775 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 VAV1P15498 845 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 CCNCP24863 283 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 CD70P32970 193 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 ETFBP38117 255 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 GDF10P55107 478 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 DR1Q01658 176 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
ATF3-208ENST00000465155 C8orf74Q6P047 294 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 LRRC49Q8IUZ0 686 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 ALLCQ8N6M5 410 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
ATF3-208ENST00000465155 FAM71DQ8N9W8 422 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 CCDC26Q8TAB7 109 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 TSGA13Q96PP4 275 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 XPO6Q96QU8 1125 aaKnown RBP13.7□□□□□ -0.22
ATF3-208ENST00000465155 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 LRRC1Q9BTT6 524 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 SP110Q9HB58 689 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 FEZ2Q9UHY8 353 aaPredicted RBP13.7□□□□□ -0.22
ATF3-208ENST00000465155 IPO11Q9UI26 975 aaKnown RBP13.7□□□□□ -0.22
ATF3-208ENST00000465155 VPS28Q9UK41 221 aa13.7□□□□□ -0.22
ATF3-208ENST00000465155 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms