RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SORT1Q99523 831 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 EPAS1Q99814 870 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 TUBB6Q9BUF5 446 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 CCDC106Q9BWC9 280 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 NEU3Q9UQ49 428 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 PATJQ8NI35 1801 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 PRR5-ARHGAP8B1AHC4 643 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 NCAM2O15394 837 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ODC1P11926 461 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ELF1P32519 619 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ARHGAP8P85298 464 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 KDSRQ06136 332 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 NAB1Q13506 487 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 KPNB1Q14974 876 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 GRTP1Q5TC63 336 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 MAVSQ7Z434 540 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 MRPL10Q7Z7H8 261 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 RSPH3Q86UC2 560 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 PIWIL2Q8TC59 973 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 OXCT2Q9BYC2 517 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 PNPOQ9NVS9 261 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 COPG2Q9UBF2 871 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 NUDT5Q9UKK9 219 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 MANSC4A6NHS7 340 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 B2RBV5 119 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 USP1O94782 785 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 F9P00740 461 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 CYBAP13498 195 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 NMBRP28336 390 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 RPL9P32969 192 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 CRHR2Q13324 411 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 TUBB3Q13509 450 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ACSBG2Q5FVE4 666 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 RWDD4Q6NW29 188 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 TEX9Q8N6V9 391 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ENDOVQ8N8Q3 282 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 GPATCH11Q8N954 259 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 SPATA22Q8NHS9 363 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ATP2A3Q93084 1043 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 TEKT5Q96M29 485 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 PKMYT1Q99640 499 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 ACBD6Q9BR61 282 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 SFMBT1Q9UHJ3 866 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 GABRQQ9UN88 632 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 RAD54BQ9Y620 910 aa19.09■□□□□ 0.65
TSPAN4-210ENST00000464987 GPR182O15218 404 aa19.08■□□□□ 0.65
TSPAN4-210ENST00000464987 CDC25CP30307 473 aa19.08■□□□□ 0.65
TSPAN4-210ENST00000464987 RBM15BQ8NDT2 890 aaKnown RBP19.08■□□□□ 0.65
TSPAN4-210ENST00000464987 MCUR1Q96AQ8 359 aa19.08■□□□□ 0.65
TSPAN4-210ENST00000464987 NDFIP2Q9NV92 336 aa19.08■□□□□ 0.65
TSPAN4-210ENST00000464987 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.08■□□□□ 0.65
TSPAN4-210ENST00000464987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 DFFAO00273 331 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 MSI1O43347 362 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 MT-CYBP00156 380 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 MX2P20592 715 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 MAGEA12P43365 314 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 LIMK2P53671 638 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 ITGA9Q13797 1035 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 KCNMB4Q86W47 210 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 MOCOSQ96EN8 888 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 IARS2Q9NSE4 1012 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 RRN3Q9NYV6 651 aa19.08■□□□□ 0.64
TSPAN4-210ENST00000464987 SERPINB6P35237 376 aa19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 CCNG1P51959 295 aa19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 PPP2R5DQ14738 602 aa19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 VWA5B1Q5TIE3 1220 aa19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 DCLRE1AQ6PJP8 1040 aa19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 DMAP1Q9NPF5 467 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 C20orf96Q9NUD7 363 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.07■□□□□ 0.64
TSPAN4-210ENST00000464987 KRT36O76013 467 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 SERPINE1P05121 402 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 OR4Q2P0C623 313 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 EIF4EBP2Q13542 120 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 RSRC1Q96IZ7 334 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 CLPTM1LQ96KA5 538 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 ADAM2Q99965 735 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 ACSS2Q9NR19 701 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 TRHDEQ9UKU6 1024 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 IGLV3-25P01717 112 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 SERPINA6P08185 405 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 SPRP35270 261 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 PTDSS1P48651 473 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 CDK18Q07002 472 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 INSCQ1MX18 579 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 ARTNQ5T4W7 220 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 ITPRIPL1Q6GPH6 555 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 NAPRTQ6XQN6 538 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 WDR75Q8IWA0 830 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 ARHGAP12Q8IWW6 846 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 IRGQQ8WZA9 623 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 ISL2Q96A47 359 aa19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 FNDC1Q4ZHG4 1894 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-210ENST00000464987 A0A096LPK6 155 aa19.05■□□□□ 0.64
TSPAN4-210ENST00000464987 B4GALT3O60512 393 aa19.05■□□□□ 0.64
TSPAN4-210ENST00000464987 CYP11A1P05108 521 aa19.05■□□□□ 0.64
TSPAN4-210ENST00000464987 ASGR1P07306 291 aa19.05■□□□□ 0.64
TSPAN4-210ENST00000464987 RALBP11234 206 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms