RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 EPS8L1Q8TE68 723 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 USP6NLQ92738 828 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 INPP4AQ96PE3 977 aaPredicted RBP13.04□□□□□ -0.32
NUP58-206ENST00000463407 ASB8Q9H765 288 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 ACP6Q9NPH0 428 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 PARP4Q9UKK3 1724 aaKnown RBP13.04□□□□□ -0.32
NUP58-206ENST00000463407 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
NUP58-206ENST00000463407 APODP05090 189 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 ACRP10323 421 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
NUP58-206ENST00000463407 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 CAMKK1Q8N5S9 505 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 OR8D1Q8WZ84 308 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 MYOCQ99972 504 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 HSD17B14Q9BPX1 270 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 TMEM120AQ9BXJ8 343 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 RHBGQ9H310 441 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 PCDHA2Q9Y5H9 948 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 OR4Q2P0C623 313 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 MAPK8P45983 427 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 RTP1P59025 263 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CRY1Q16526 586 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CAVIN3Q969G5 261 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 MTFMTQ96DP5 389 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 CCDC134Q9H6E4 229 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.03□□□□□ -0.32
NUP58-206ENST00000463407 NAALADL1Q9UQQ1 740 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 TMEM114B3SHH9 223 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 APOC4-APOC2K7ER74 178 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 XPO1O14980 1071 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 APOC2P02655 101 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 FGRP09769 529 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 PSMB4P28070 264 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 GTF2E2P29084 291 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 GP5P40197 560 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 ZFYVE1Q9HBF4 777 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 PARVBQ9HBI1 364 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 A0A1W2PQH9 124 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CYP1A2P05177 515 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 MIIPQ5JXC2 388 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 ZNF655Q8N720 491 aaPredicted RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 TRMT13Q9NUP7 481 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 PPP1R11O60927 126 aaPredicted RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 DGKAP23743 735 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 HTR1BP28222 390 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 DPYSL3Q14195 570 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 FOXR1Q6PIV2 292 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 SH3BP5LQ7L8J4 393 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 PSTKQ8IV42 348 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 BBS4Q96RK4 519 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 TCF25Q9BQ70 676 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 YIPF3Q9GZM5 350 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 SIGLEC1Q9BZZ2 1709 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 LGR5O75473 907 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CCNB1P14635 433 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 PSMA4P25789 261 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 ILF2Q12905 390 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 ITIH4Q14624 930 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 RRP1BQ14684 758 aaKnown RBP13.03□□□□□ -0.32
NUP58-206ENST00000463407 MEA1Q16626 185 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CCDC153Q494R4 210 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 CAAP1Q9H8G2 361 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 MON2Q7Z3U7 1717 aa13.03□□□□□ -0.32
NUP58-206ENST00000463407 SLCO1B7G3V0H7 640 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 SH3BGRLO75368 114 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 SKP1P63208 163 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 FBXW10Q5XX13 1052 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 DLK2Q6UY11 383 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 METTL3Q86U44 580 aaKnown RBP13.02□□□□□ -0.32
NUP58-206ENST00000463407 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.32
NUP58-206ENST00000463407 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 ARL15Q9NXU5 204 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 KIAA1522Q9P206 1035 aaPredicted RBP13.02□□□□□ -0.32
NUP58-206ENST00000463407 POLG2Q9UHN1 485 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 GNPTGQ9UJJ9 305 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 VAV3Q9UKW4 847 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 ANKRD6Q9Y2G4 727 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 E9PBE3 544 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 KLHL41O60662 606 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 CCNE2O96020 404 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms