RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 MYO19Q96H55 970 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 CAPN10Q9HC96 672 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 SLCO3A1Q9UIG8 710 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 FZD4Q9ULV1 537 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 ADAMTS9Q9P2N4 1935 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 NUMA1Q14980 2115 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 MED19A0JLT2 244 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 FAM170AA1A519 330 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 SYCE3A1L190 88 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 DRGXA6NNA5 263 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 ALOX15BO15296 676 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 BCAT2O15382 392 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 RNASEH2AO75792 299 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 ENDOD1O94919 500 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 IL1BP01584 269 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 CSRP1P21291 193 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 GPD1P21695 349 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 C5AR1P21730 350 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 SLC8A1P32418 973 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 GGCXP38435 758 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 CLCN6P51797 869 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 ASIC2Q16515 512 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 CDO1Q16878 200 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 SFMBT2Q5VUG0 894 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 RETSATQ6NUM9 610 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 DCUN1D2Q6PH85 259 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 C14orf80Q86SX3 495 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 MMAAQ8IVH4 418 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 ZCCHC9Q8N567 271 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 EMC1Q8N766 993 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 IQCDQ96DY2 449 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 VCPIP1Q96JH7 1222 aa13.45□□□□□ -0.26
HDAC1-203ENST00000463172 PPARGC1AQ9UBK2 798 aaKnown RBP13.45□□□□□ -0.26
HDAC1-203ENST00000463172 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 C2CD4BA6NLJ0 364 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 CDX4O14627 284 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 TM4SF5O14894 197 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 MID1O15344 667 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 TEX33O43247 280 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ATP9BO43861 1147 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 CNTN5O94779 1100 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 FSBPO95073 299 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 KCNK5O95279 499 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 CER1O95813 267 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 TPM3P06753 285 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ADRB1P08588 477 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 GOT1P17174 413 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ACSL1P33121 698 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 RECQLP46063 649 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 PSMD8P48556 350 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 STK19P49842 368 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 NOVA1P51513 510 aaKnown RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 NRG1Q02297 640 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 SLC20A2Q08357 652 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 SLC14A1Q13336 389 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 HNRNPDQ14103 355 aaKnown RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 DLG2Q15700 870 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 EFHC2Q5JST6 749 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ACAD10Q6JQN1 1059 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 BNIPLQ7Z465 357 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 TFAP2DQ7Z6R9 452 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 PHLDB2Q86SQ0 1253 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 STK40Q8N2I9 435 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 MINDY1Q8N5J2 469 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 DCAF4L2Q8NA75 395 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ATP11CQ8NB49 1132 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 FAM172AQ8WUF8 416 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 PCDHB18PQ96TA0 734 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 OSBPL2Q9H1P3 480 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 MTG2Q9H4K7 406 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 OSGEPQ9NPF4 335 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 OR12D3Q9UGF7 316 aa13.44□□□□□ -0.26
HDAC1-203ENST00000463172 EIF2B4Q9UI10 523 aaKnown RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.44□□□□□ -0.26
HDAC1-203ENST00000463172 A0A1W2PP55 124 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 LRRC53A6NM62 1247 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 SLC7A4O43246 635 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 CEACAM1P13688 526 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 CD27P26842 260 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 MAOBP27338 520 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 ADRA1BP35368 520 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 MAPKAPK2P49137 400 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 ZNF143P52747 638 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-203ENST00000463172 AIF1P55008 147 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 GEMIN4P57678 1058 aaKnown RBP13.43□□□□□ -0.26
HDAC1-203ENST00000463172 PTP4A2Q12974 167 aa13.43□□□□□ -0.26
HDAC1-203ENST00000463172 IQCB1Q15051 598 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms