RNA–Protein interactions for RNA: ENST00000463083.1

SMIM29-204, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-204ENST00000463083 SNX1Q13596 522 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 TUBB2AQ13885 445 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 SIX1Q15475 284 aaPredicted RBP18.48■□□□□ 0.55
SMIM29-204ENST00000463083 WHAMMP3Q1A5X7 153 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 NAIF1Q69YI7 327 aaPredicted RBP18.48■□□□□ 0.55
SMIM29-204ENST00000463083 GRAMD4Q6IC98 578 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 ZNF783Q6ZMS7 281 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 B4GALNT4Q76KP1 1039 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 ATPAF2Q8N5M1 289 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 CCNYQ8ND76 341 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 ARHGEF2Q92974 986 aaKnown RBP18.48■□□□□ 0.55
SMIM29-204ENST00000463083 FEM1AQ9BSK4 669 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 TUBB2BQ9BVA1 445 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 ATP13A1Q9HD20 1204 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 TRPV5Q9NQA5 729 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 FBXO10Q9UK96 956 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 RAD54BQ9Y620 910 aa18.48■□□□□ 0.55
SMIM29-204ENST00000463083 H7C0C1 242 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 MCF2LO15068 1137 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 OPRD1P41143 372 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 ATP5OP48047 213 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 EIF3EP60228 445 aaKnown RBP18.47■□□□□ 0.55
SMIM29-204ENST00000463083 CKAP4Q07065 602 aaKnown RBP18.47■□□□□ 0.55
SMIM29-204ENST00000463083 GALNT2Q10471 571 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 PDK1Q15118 436 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 NOMO1Q15155 1222 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 ARHGAP36Q6ZRI8 547 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 RNF135Q8IUD6 432 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 APCDD1Q8J025 514 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 LGMNQ99538 433 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 SLC2A4RGQ9NR83 387 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 HPCAL4Q9UM19 191 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 DUSP12Q9UNI6 340 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 SORCS3Q9UPU3 1222 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 PIAS3Q9Y6X2 628 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 MIA3Q5JRA6 1907 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 COL4A3Q01955 1670 aa18.47■□□□□ 0.55
SMIM29-204ENST00000463083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.46■□□□□ 0.55
SMIM29-204ENST00000463083 SPECC1L-ADORA2AF8WAN1 911 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 CBX4O00257 560 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
SMIM29-204ENST00000463083 NCAM2O15394 837 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 CISD3P0C7P0 127 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 GARSP41250 739 aaKnown RBP18.46■□□□□ 0.55
SMIM29-204ENST00000463083 AP1B1Q10567 949 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 SERINC3Q13530 473 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 SLC12A1Q13621 1099 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 PLEKHG6Q3KR16 790 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 PITRM1Q5JRX3 1037 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 PRELID2Q8N945 189 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 CHFRQ96EP1 664 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 LMLNQ96KR4 655 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 OLFM3Q96PB7 478 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 IPO11Q9UI26 975 aaKnown RBP18.46■□□□□ 0.55
SMIM29-204ENST00000463083 F5P12259 2224 aa18.46■□□□□ 0.55
SMIM29-204ENST00000463083 RBP3P10745 1247 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 GLDCP23378 1020 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 CTHP32929 405 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 MESP2Q0VG99 397 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 FUT11Q495W5 492 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 DARS2Q6PI48 645 aaKnown RBP18.46■□□□□ 0.54
SMIM29-204ENST00000463083 GJD3Q8N144 294 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 AHI1Q8N157 1196 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 TFB1MQ8WVM0 346 aaKnown RBP18.46■□□□□ 0.54
SMIM29-204ENST00000463083 MAGOHBQ96A72 148 aaKnown RBP18.46■□□□□ 0.54
SMIM29-204ENST00000463083 PNKPQ96T60 521 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 C2orf49Q9BVC5 232 aaPredicted RBP18.46■□□□□ 0.54
SMIM29-204ENST00000463083 C8orf33Q9H7E9 229 aaPredicted RBP18.46■□□□□ 0.54
SMIM29-204ENST00000463083 C10orf88Q9H8K7 445 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 SP110Q9HB58 689 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 HOMER3Q9NSC5 361 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 INTS6Q9UL03 887 aaKnown RBP18.46■□□□□ 0.54
SMIM29-204ENST00000463083 DNPEPQ9ULA0 475 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 SLC27A6Q9Y2P4 619 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 OR51B4Q9Y5P0 310 aa18.46■□□□□ 0.54
SMIM29-204ENST00000463083 SHROOM3Q8TF72 1996 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 NYNRINQ9P2P1 1898 aaKnown RBP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 CHD5Q8TDI0 1954 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 TBC1D3BA6NDS4 549 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 LIASO43766 372 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 SNAP91O60641 907 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 EIF2DP41214 584 aaKnown RBP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 XRCC4Q13426 336 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 BYSLQ13895 437 aaKnown RBP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 CCNG2Q16589 344 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 GEN1Q17RS7 908 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 PREPLQ4J6C6 727 aaPredicted RBP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 SLC44A4Q53GD3 710 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 IER5LQ5T953 404 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 LEKR1Q6ZMV7 388 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 RALGPS2Q86X27 583 aaPredicted RBP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 LRRC49Q8IUZ0 686 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 DCAF4L2Q8NA75 395 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 ALG14Q96F25 216 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 P2RY13Q9BPV8 354 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 FRMD8P1Q9BZ68 369 aaPredicted RBP18.45■□□□□ 0.54
SMIM29-204ENST00000463083 CIPCQ9C0C6 399 aa18.45■□□□□ 0.54
SMIM29-204ENST00000463083 J3KR12 359 aa18.44■□□□□ 0.54
SMIM29-204ENST00000463083 KDELR3O43731 214 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms