RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SLC2A13Q96QE2 648 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 MUC3BQ9H195 1237 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 EBF2Q9HAK2 575 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 SCUBE2Q9NQ36 999 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 RWDD2AQ9UIY3 292 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 AKAP13Q12802 2813 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 PKD1L2Q7Z442 2459 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 A0A1W2PR77 199 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 EIF4E1BA6NMX2 242 aaKnown RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 ALOX15BO15296 676 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 BNIP3LO60238 219 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 GRAP2O75791 330 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 WNT1P04628 370 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 EPHA8P29322 1005 aaPredicted RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 NUMBP49757 651 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 VASPP50552 380 aaPredicted RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 NXPH1P58417 271 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 PITX1P78337 314 aaPredicted RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 KRT83P78385 493 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 OVGP1Q12889 678 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 AUHQ13825 339 aaKnown RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 ACAP1Q15027 740 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 SETMARQ53H47 684 aaPredicted RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 HS1BP3Q53T59 392 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 C6orf118Q5T5N4 469 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 GJB7Q6PEY0 223 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 PASD1Q8IV76 773 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 MFSD2AQ8NA29 543 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 SAP25Q8TEE9 199 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 NXPE2Q96DL1 559 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 PRMT1Q99873 361 aaKnown RBP15.83■□□□□ 0.12
SKA3-204ENST00000462482 ERVMER34-1Q9H9K5 563 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 ACP6Q9NPH0 428 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 RRN3Q9NYV6 651 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 VANGL2Q9ULK5 521 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
SKA3-204ENST00000462482 CACNA1GO43497 2377 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 LATO43561 262 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 ATP9BO43861 1147 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 RTN2O75298 545 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 HOXB3P14651 431 aaPredicted RBP15.82■□□□□ 0.12
SKA3-204ENST00000462482 VAV1P15498 845 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 SLC9A1P19634 815 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 MAT2AP31153 395 aaKnown RBP15.82■□□□□ 0.12
SKA3-204ENST00000462482 NOS2P35228 1153 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 MTIF2P46199 727 aaKnown RBP15.82■□□□□ 0.12
SKA3-204ENST00000462482 CENPCQ03188 943 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 DLG2Q15700 870 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 CXorf57Q6NSI4 855 aaKnown RBP15.82■□□□□ 0.12
SKA3-204ENST00000462482 IQCHQ86VS3 1027 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 MARCH9Q86YJ5 346 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 FRS2Q8WU20 508 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 SHC3Q92529 594 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 CPXM1Q96SM3 734 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 FEM1AQ9BSK4 669 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 SIK2Q9H0K1 926 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 DYRK4Q9NR20 520 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 TMEM51Q9NW97 253 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 STAP1Q9ULZ2 295 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 PCDHGC3Q9UN70 934 aa15.82■□□□□ 0.12
SKA3-204ENST00000462482 GTPBP10A4D1E9 387 aaKnown RBP15.81■□□□□ 0.12
SKA3-204ENST00000462482 BECN2A8MW95 431 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 MUC22E2RYF6 1773 aaPredicted RBP15.81■□□□□ 0.12
SKA3-204ENST00000462482 PRAMEF26H0Y7S4 382 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 M0QYT0 321 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 MCF2LO15068 1137 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 PLRG1O43660 514 aaKnown RBP15.81■□□□□ 0.12
SKA3-204ENST00000462482 DAB1O75553 588 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 DRD3P35462 400 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 RXRGP48443 463 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 CDH4P55283 916 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 BPIFB4P59827 614 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 PPP2CBP62714 309 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 PPP2CAP67775 309 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 SLC6A3Q01959 620 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 EIF4EBP2Q13542 120 aaPredicted RBP15.81■□□□□ 0.12
SKA3-204ENST00000462482 LRRC31Q6UY01 552 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 FAM183BPQ6ZVS7 135 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 TRIM69Q86WT6 500 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 ZDHHC17Q8IUH5 632 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 C1orf131Q8NDD1 294 aaKnown RBP15.81■□□□□ 0.12
SKA3-204ENST00000462482 PIP4K2CQ8TBX8 421 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 LRIG1Q96JA1 1093 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 C2orf49Q9BVC5 232 aaPredicted RBP15.81■□□□□ 0.12
SKA3-204ENST00000462482 WDCPQ9H6R7 721 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 PREBQ9HCU5 417 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 HS3ST4Q9Y661 456 aa15.81■□□□□ 0.12
SKA3-204ENST00000462482 WNT9AO14904 365 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 RNGTTO60942 597 aaKnown RBP15.8■□□□□ 0.12
SKA3-204ENST00000462482 PAGE1O75459 146 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 RHOCP08134 193 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 RECQLP46063 649 aaPredicted RBP15.8■□□□□ 0.12
SKA3-204ENST00000462482 CNTN1Q12860 1018 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 DNAJC3Q13217 504 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 ILKQ13418 452 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 CAMK2BQ13554 666 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 SHBQ15464 509 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 POM121L1PQ3SYA9 428 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 BRMS1LQ5PSV4 323 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms