RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 C2CD4DB7Z1M9 353 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 RASA4BC9J798 803 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 NEDD8-MDP1E9PL57 170 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 TRDMT1O14717 391 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 NDC80O14777 642 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 RASA4O43374 803 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 KDELR3O43731 214 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 MFSD11O43934 449 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 ECEL1O95672 775 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 CYP17A1P05093 508 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 TUBBP07437 444 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 PECAM1P16284 738 aaPredicted RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 GDI1P31150 447 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 ACTN2P35609 894 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 PAPOLAP51003 745 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 RENBPP51606 427 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 IL10RBQ08334 325 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 SERINC3Q13530 473 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 RFTN1Q14699 578 aaPredicted RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 PRKD1Q15139 912 aaPredicted RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 CXorf57Q6NSI4 855 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 RETSATQ6NUM9 610 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 CARNMT1Q8N4J0 409 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 ATPAF2Q8N5M1 289 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 NPWQ8N729 165 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.93□□□□□ -0.66
RTF1-202ENST00000462276 CCDC89Q8N998 374 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 DCAF4L2Q8NA75 395 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 CCNYQ8ND76 341 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 WFIKKN2Q8TEU8 576 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 CASKIN2Q8WXE0 1202 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 RSAD2Q8WXG1 361 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 DNASE1L2Q92874 299 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 ARHGEF2Q92974 986 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 RTP4Q96DX8 246 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 MYEOVQ96EZ4 313 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 MSANTD3Q96H12 275 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 PPP1R2P1Q96PQ5 205 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 QKIQ96PU8 341 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■■■■■ 28.9
RTF1-202ENST00000462276 FEM1AQ9BSK4 669 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 ACE2Q9BYF1 805 aaPredicted RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 SLC39A8Q9C0K1 460 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 NOL6Q9H6R4 1146 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 BRD9Q9H8M2 597 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 KCNK12Q9HB15 430 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 SMARCAL1Q9NZC9 954 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 SAE1Q9UBE0 346 aaPredicted RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 IPO11Q9UI26 975 aaKnown RBP10.93□□□□□ -0.66
RTF1-202ENST00000462276 TRHDEQ9UKU6 1024 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 DNPEPQ9ULA0 475 aa10.93□□□□□ -0.66
RTF1-202ENST00000462276 C5orf60A6NFR6 353 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 LOC730098B7Z3J9 87 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 DFFAO00273 331 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 ARNTLO00327 626 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 SCAMP3O14828 347 aaKnown RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 MATN3O15232 486 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 MAFKO60675 156 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 PRAMEF11O60813 436 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 OPHN1O60890 802 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 VASPP50552 380 aaPredicted RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 IRAK1P51617 712 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 SGSHP51688 502 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 DR1Q01658 176 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 INO80DQ53TQ3 878 aaPredicted RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 IL31Q6EBC2 164 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 NPNTQ6UXI9 565 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 GSTA5Q7RTV2 222 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 KIAA0907Q7Z7F0 614 aaPredicted RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 ZC3H18Q86VM9 953 aaKnown RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 ADHFE1Q8IWW8 467 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 CCDC13Q8IYE1 715 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 BBS5Q8N3I7 341 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 SLC44A3Q8N4M1 653 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 ALLCQ8N6M5 410 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 CSGALNACT1Q8TDX6 532 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 ATXN2LQ8WWM7 1075 aaKnown RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 HTR3CQ8WXA8 447 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 ATG4AQ8WYN0 398 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 HMCESQ96FZ2 354 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 LMLNQ96KR4 655 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 KRT12Q99456 494 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 KXD1Q9BQD3 176 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 PLA2G2FQ9BZM2 168 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 MUC3BQ9H195 1237 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 EBF3Q9H4W6 596 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 C8orf33Q9H7E9 229 aaPredicted RBP10.92□□□□□ -0.66
RTF1-202ENST00000462276 USP29Q9HBJ7 922 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 HPS4Q9NQG7 708 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 NDFIP2Q9NV92 336 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 DEC1Q9P2X7 70 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 LIMD1Q9UGP4 676 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 OR51B4Q9Y5P0 310 aa10.92□□□□□ -0.66
RTF1-202ENST00000462276 MYO16Q9Y6X6 1858 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 SGK1O00141 431 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 GCATO75600 419 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 ASLP04424 464 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms