RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SLC8A3P57103 927 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 MYL7Q01449 175 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 CETN1Q12798 172 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 UBAP2LQ14157 1087 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 KCNJ12Q14500 433 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 RTP5Q14D33 572 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SGSM1Q2NKQ1 1148 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ERCC6LQ2NKX8 1250 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF699Q32M78 642 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ZACNQ401N2 412 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 HSP90AA4PQ58FG1 418 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 C1orf220Q5T0J3 134 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SYCP2LQ5T4T6 812 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 EMC10Q5UCC4 262 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 TDRD10Q5VZ19 366 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 KRT39Q6A163 491 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SV2AQ7L0J3 742 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 RSRC2Q7L4I2 434 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ITIH5Q86UX2 942 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 METTL23Q86XA0 190 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 CCDC50Q8IVM0 306 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 AOPEPQ8N6M6 819 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 LRRC52Q8N7C0 313 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 IL17RCQ8NAC3 791 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ACRBPQ8NEB7 543 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 APPL2Q8NEU8 664 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 NEK11Q8NG66 645 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 RIN3Q8TB24 985 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 C17orf50Q8WW18 174 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 TTC9Q92623 222 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SLC35C1Q96A29 364 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM176AQ96HP8 235 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF419Q96HQ0 510 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 HSPA12BQ96MM6 686 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 AGAP3Q96P47 875 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 IMPG2Q9BZV3 1241 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 CPNE5Q9HCH3 593 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM8AQ9HCN3 771 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SAMSN1Q9NSI8 373 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 FANCLQ9NW38 375 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 UBP1Q9NZI7 540 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SUSD2Q9UGT4 822 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SUN2Q9UH99 717 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SIX4Q9UIU6 781 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 HEMK1Q9Y5R4 338 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SNX9Q9Y5X1 595 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 CENPEQ02224 2701 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TCRBV21S2A2A0A5A6 115 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 GOLGA6L10A6NI86 522 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 M0QZQ0 153 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 CYB561D2O14569 222 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 MAP2K7O14733 419 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 SMAD7O15105 426 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 CHUKO15111 745 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 FLRT2O43155 660 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 CILPO75339 1184 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 ERLIN1O75477 346 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 VNN1O95497 513 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 CST3P01034 146 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 HLA-DRAP01903 254 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 AFPP02771 609 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 ODC1P11926 461 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 P4HA1P13674 534 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 CES1P23141 567 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 EEF1GP26641 437 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 CDC25CP30307 473 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 ATICP31939 592 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 OPRD1P41143 372 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 MATKP42679 507 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 IFNAR2P48551 515 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 FMO5P49326 533 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 AARSP49588 968 aaKnown RBP eCLIP6.24□□□□□ -1.415e-11■□□□□ 10.3
SMARCC1-204ENST00000462198 LIG3P49916 1009 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 MYL6P60660 151 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 PSMC1P62191 440 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TNNC1P63316 161 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 YWHAHQ04917 246 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TARDBPQ13148 414 aaKnown RBP eCLIP6.24□□□□□ -1.412e-9■■■■□ 23.9
SMARCC1-204ENST00000462198 GPR17Q13304 367 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 SLMAPQ14BN4 828 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TAF12Q16514 161 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 MAN2A1Q16706 1144 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 HLA-BQ31612 363 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 WDR72Q3MJ13 1102 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TCP11X2Q5H9J9 407 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF667Q5HYK9 610 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 EOGTQ5NDL2 527 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 BROXQ5VW32 411 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TXNDC8Q6A555 127 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 IRF2BP1Q8IU81 584 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 APLFQ8IW19 511 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 TRIM59Q8IWR1 403 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 REXO1L1PQ8IX06 675 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 ATAD1Q8NBU5 361 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 GALNT6Q8NCL4 622 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 LRRN4CLQ8ND94 238 aa6.24□□□□□ -1.41
SMARCC1-204ENST00000462198 FBXL13Q8NEE6 735 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms