RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CCDC117Q8IWD4 279 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-202ENST00000461433 ARHGAP12Q8IWW6 846 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 TP53INP2Q8IXH6 220 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 RCOR2Q8IZ40 523 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 NETO2Q8NC67 525 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 OR7D4Q8NG98 312 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 EXD1Q8NHP7 514 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 WFIKKN2Q8TEU8 576 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 USP33Q8TEY7 942 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 PBXIP1Q96AQ6 731 aa11.56□□□□□ -0.56
SSBP1-202ENST00000461433 ACE2Q9BYF1 805 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-202ENST00000461433 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
SSBP1-202ENST00000461433 FAM86C2PA6NEL3 165 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 TIMM44O43615 452 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 RNF40O75150 1001 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ZMPSTE24O75844 475 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ZRANB2O95218 330 aaKnown RBP eCLIP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 DCNP07585 359 aaKnown RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 PYGMP11217 842 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 HNRNPLP14866 589 aaKnown RBP eCLIP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 GLDCP23378 1020 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 RPS9P46781 194 aaKnown RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 NDST2P52849 883 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SEC13P55735 322 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 EIF4HQ15056 248 aaKnown RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 FBXO43Q4G163 708 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 EGFLAMQ63HQ2 1017 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 NCBP2-AS2Q69YL0 99 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SPOCD1Q6ZMY3 1216 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 C17orf53Q8N3J3 647 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SYNPOQ8N3V7 929 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 MYO19Q96H55 970 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ACOX2Q99424 681 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 HERPUD2Q9BSE4 406 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SLC39A8Q9C0K1 460 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 MAGEH1Q9H213 219 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ZDHHC4Q9NPG8 344 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 hCG_1818297A0A087WSY0 165 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SNAP91O60641 907 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 RAMP2O60895 175 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 KRT10P13645 584 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 POLR2EP19388 210 aaKnown RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 TIE1P35590 1138 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 RWDD2BP57060 319 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 YBEYP58557 167 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SLC10A2Q12908 348 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ENPP2Q13822 863 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 LRRC32Q14392 662 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 POLD3Q15054 466 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 PAFAH1B3Q15102 231 aaKnown RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 C2orf27AQ580R0 203 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 SLC9A4Q6AI14 798 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 AADACL2Q6P093 401 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 TMCO3Q6UWJ1 677 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 PLD5Q8N7P1 536 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 TMEM105Q8N8V8 129 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 IL17RCQ8NAC3 791 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 CYB5D2Q8WUJ1 264 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 HMCESQ96FZ2 354 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 CELF6Q96J87 481 aaKnown RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 ALS2CR12Q96Q35 445 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 TLR10Q9BXR5 811 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 CIPCQ9C0C6 399 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 MUC3BQ9H195 1237 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 CHRDQ9H2X0 955 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 THAP10Q9P2Z0 257 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-202ENST00000461433 VPS28Q9UK41 221 aa11.55□□□□□ -0.56
SSBP1-202ENST00000461433 GOLGA6L9A6NEM1 432 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 CHURC1-FNTBB4DL54 471 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 WASH3PC4AMC7 463 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 RASA4BC9J798 803 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 NCAM2O15394 837 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 RASA4O43374 803 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 GPR37L1O60883 481 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 ADAM23O75077 832 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 CD160O95971 181 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 DLDP09622 509 aaKnown RBP11.54□□□□□ -0.56
SSBP1-202ENST00000461433 MRPS21P82921 87 aaKnown RBP11.54□□□□□ -0.56
SSBP1-202ENST00000461433 ARF5P84085 180 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 ECT2LQ008S8 904 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 SERINC3Q13530 473 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 ZNF234Q14588 700 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 LLGL1Q15334 1064 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 PARP15Q460N3 678 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 TFDP3Q5H9I0 405 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 FBXL6Q8N531 539 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 LZTR1Q8N653 840 aa11.54□□□□□ -0.56
SSBP1-202ENST00000461433 ALLCQ8N6M5 410 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms