RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 CLNS1AP54105 237 aaKnown RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 CASP6P55212 293 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 PROK1P58294 105 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 RPP30P78346 268 aaKnown RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 B4GALNT1Q00973 533 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 GALNT2Q10471 571 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 PFKFB3Q16875 520 aaPredicted RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 LRRC24Q50LG9 513 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 CC2D1BQ5T0F9 858 aaKnown RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 MZT2BQ6NZ67 158 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 INO80CQ6PI98 192 aaPredicted RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 SCN4BQ8IWT1 228 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 UEVLDQ8IX04 471 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 C16orf71Q8IYS4 520 aaPredicted RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 NFKBIDQ8NI38 313 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 TBC1D22AQ8WUA7 517 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 STAMQ92783 540 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 ATP2A3Q93084 1043 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 ZUFSPQ96AP4 578 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 HERC2P3Q9BVR0 1158 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 ARHGAP39Q9C0H5 1083 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 INTS2Q9H0H0 1204 aaKnown RBP4.16□□□□□ -1.74
CLK1-206ENST00000461326 PDCL3Q9H2J4 239 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 ARL8BQ9NVJ2 186 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 PKP3Q9Y446 797 aa4.16□□□□□ -1.74
CLK1-206ENST00000461326 TDRD9Q8NDG6 1382 aaKnown RBP4.15□□□□□ -1.74
CLK1-206ENST00000461326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 TCRBV5S1A1TA0A578 114 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 TMEM232C9JQI7 657 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 F9P00740 461 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 HLA-DQA2P01906 255 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 HSP90AA1P07900 732 aaKnown RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 CELA2AP08217 269 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 ALDOCP09972 364 aaKnown RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 AKR1A1P14550 325 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 PKMP14618 531 aaKnown RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 PSMA4P25789 261 aaKnown RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 GSTM2P28161 218 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 ABCD3P28288 659 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 TACR3P29371 465 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 PTGER1P34995 402 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 GJC1P36383 396 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 STAT1P42224 750 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 VPS41P49754 854 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 ADPRHP54922 357 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 PDE1CQ14123 709 aaPredicted RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 SEC23BQ15437 767 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 NFIL3Q16649 462 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 PRICKLE4Q2TBC4 344 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 SLC9C2Q5TAH2 1124 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 AADACL2Q6P093 401 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 KIAA1324Q6UXG2 1013 aaKnown RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 ADGRG6Q86SQ4 1221 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 FAM47BQ8NA70 645 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 OR52N4Q8NGI2 321 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 ZFPM2Q8WW38 1151 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 KCNJ9Q92806 393 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 ZBTB9Q96C00 473 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 REPS1Q96D71 796 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 APOPT1Q96IL0 206 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 GPR78Q96P69 363 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 TREX2Q9BQ50 279 aaPredicted RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 ABHD14AQ9BUJ0 271 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 PHF7Q9BWX1 381 aaPredicted RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 NPLQ9BXD5 320 aaPredicted RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 VEZTQ9HBM0 779 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 KLQ9UEF7 1012 aa4.15□□□□□ -1.75
CLK1-206ENST00000461326 LAS1LQ9Y4W2 734 aaKnown RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 HEMK1Q9Y5R4 338 aaPredicted RBP4.15□□□□□ -1.75
CLK1-206ENST00000461326 LMTK3Q96Q04 1460 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 FAM90A7PA6NKC0 464 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 FAM90A22PA8MWA6 464 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 FAM90A12PA8MX19 464 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 FAM90A23PA8MXZ1 464 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 DSCR3O14972 297 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 SYN3O14994 580 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 KAT7O95251 611 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 SCGB1D1O95968 90 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 RFPL3SP0C7P2 107 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 ATP1A3P13637 1013 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 BDNFP23560 247 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 ARHGAP8P85298 464 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 SLC14A1Q13336 389 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 GAB1Q13480 694 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 BYSLQ13895 437 aaKnown RBP4.14□□□□□ -1.75
CLK1-206ENST00000461326 ANXA2RQ3ZCQ2 193 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 GJB7Q6PEY0 223 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 ZNF474Q6S9Z5 364 aaPredicted RBP4.14□□□□□ -1.75
CLK1-206ENST00000461326 RANBP10Q6VN20 620 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 TBC1D1Q86TI0 1168 aaPredicted RBP4.14□□□□□ -1.75
CLK1-206ENST00000461326 RFX6Q8HWS3 928 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 PAQR4Q8N4S7 273 aaPredicted RBP4.14□□□□□ -1.75
CLK1-206ENST00000461326 TDRD7Q8NHU6 1098 aaKnown RBP4.14□□□□□ -1.75
CLK1-206ENST00000461326 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 HASPINQ8TF76 798 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 UCMAQ8WVF2 138 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 CENPIQ92674 756 aaPredicted RBP4.14□□□□□ -1.75
CLK1-206ENST00000461326 KAT2BQ92831 832 aa4.14□□□□□ -1.75
CLK1-206ENST00000461326 CELF1Q92879 486 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms