RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-204ENST00000461044 RUFY2Q8WXA3 655 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 RSPH1Q8WYR4 309 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 LINC00476Q8WZB0 136 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 SNX21Q969T3 373 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 FUBP1Q96AE4 644 aaKnown RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 FAM120BQ96EK7 910 aaKnown RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 MARS2Q96GW9 593 aaKnown RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 LENG8Q96PV6 779 aaPredicted RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 HIST1H2AAQ96QV6 131 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 ADPGKQ9BRR6 497 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 OR10A4Q9H209 315 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 CCDC134Q9H6E4 229 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 SYNCQ9H7C4 482 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 GRPEL1Q9HAV7 217 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 SEMA4BQ9NPR2 832 aaPredicted RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 ATP8A2Q9NTI2 1148 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 ETAA1Q9NY74 926 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 HSFX1Q9UBD0 423 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 DNAJB11Q9UBS4 358 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 SLC25A10Q9UBX3 287 aaPredicted RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 VPS51Q9UID3 782 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 PACSIN3Q9UKS6 424 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 ISY1Q9ULR0 285 aaKnown RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 CORO1CQ9ULV4 474 aaPredicted RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.47□□□□□ -1.85
FXR1-204ENST00000461044 MEGF6O75095 1541 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 PKD1L3Q7Z443 1732 aa3.47□□□□□ -1.85
FXR1-204ENST00000461044 KDM3AQ9Y4C1 1321 aa3.46□□□□□ -1.85
FXR1-204ENST00000461044 TNRC6CQ9HCJ0 1690 aaKnown RBP3.46□□□□□ -1.85
FXR1-204ENST00000461044 DCCP43146 1447 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 ADGRL3Q9HAR2 1447 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 TRPM2O94759 1503 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 A0A1B0GTW7 788 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 NPIPB15A6NHN6 443 aaPredicted RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 AGAP5A6NIR3 686 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 SLC38A8A6NNN8 435 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 SMTNL1A8MU46 457 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 M0QZQ0 153 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 POLRMTO00411 1230 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 CBFA2T3O75081 653 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 HEXIM1O94992 359 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 SCGB1D1O95968 90 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 CHEK2O96017 543 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 URODP06132 367 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 SPARCP09486 303 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 CHN1P15882 459 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 FGFR4P22455 802 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 NFKBIAP25963 317 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 DDX6P26196 483 aaKnown RBP eCLIP3.46□□□□□ -1.86
FXR1-204ENST00000461044 ADRA1BP35368 520 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 PBX1P40424 430 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 GATMP50440 423 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 PDE6CP51160 858 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 PPP5CP53041 499 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 SNX16P57768 344 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 FAM3BP58499 235 aaPredicted RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 PPARDQ03181 441 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 STK4Q13043 487 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 MED22Q15528 200 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 P3H1Q32P28 736 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 BMP2KLQ5H9B9 411 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 HECTD2Q5U5R9 776 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 LIPMQ5VYY2 423 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 PIK3AP1Q6ZUJ8 805 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 GPR149Q86SP6 731 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 TTC30AQ86WT1 665 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 CEP97Q8IW35 865 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 TAGAPQ8N103 731 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 SRBD1Q8N5C6 995 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 ANKRD44Q8N8A2 993 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 AVL9Q8NBF6 648 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 LSM14AQ8ND56 463 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 TBC1D5Q92609 795 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 CNDP2Q96KP4 475 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 MOGAT1Q96PD6 335 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 PPP1R10Q96QC0 940 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 HAPLN3Q96S86 360 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 NUDT22Q9BRQ3 303 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 SIK2Q9H0K1 926 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 NDST4Q9H3R1 872 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 TOR3AQ9H497 397 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 STN1Q9H668 368 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 CXorf36Q9H7Y0 433 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 PDE7BQ9NP56 450 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 LIN7CQ9NUP9 197 aaKnown RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 TMEM74BQ9NUR3 256 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 HCFC1R1Q9NWW0 138 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 CWC25Q9NXE8 425 aaPredicted RBP3.46□□□□□ -1.86
FXR1-204ENST00000461044 TAS2R10Q9NYW0 307 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 NEU2Q9Y3R4 380 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 LYVE1Q9Y5Y7 322 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 RAD54BQ9Y620 910 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 COL24A1Q17RW2 1714 aa3.46□□□□□ -1.86
FXR1-204ENST00000461044 NOS1P29475 1434 aa3.45□□□□□ -1.86
FXR1-204ENST00000461044 LMTK2Q8IWU2 1503 aa3.45□□□□□ -1.86
FXR1-204ENST00000461044 TUBGCP6Q96RT7 1819 aa3.45□□□□□ -1.86
FXR1-204ENST00000461044 LOC105369274A0A096LPK9 316 aa3.45□□□□□ -1.86
FXR1-204ENST00000461044 LOC102723532A0A0G2JNH3 316 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms