RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 ACTR8Q9H981 624 aa17.98■□□□□ 0.47
CHRD-208ENST00000460627 NOCTQ9UK39 431 aaKnown RBP17.98■□□□□ 0.47
CHRD-208ENST00000460627 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
CHRD-208ENST00000460627 RAD51BO15315 384 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 PAGE1O75459 146 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 ETS1P14921 441 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 PTP4A2Q12974 167 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 KRT72Q14CN4 511 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 FBXL19Q6PCT2 694 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 MREGQ8N565 214 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 SHCBP1LQ9BZQ2 653 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 ATP13A3Q9H7F0 1226 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 UTP6Q9NYH9 597 aaKnown RBP17.97■□□□□ 0.47
CHRD-208ENST00000460627 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHRD-208ENST00000460627 NCKAP1Q9Y2A7 1128 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 CYP2A7P20853 494 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 SLC5A3P53794 718 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 LDLRAD1Q5T700 205 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 PMF1Q6P1K2 205 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 KLC4Q9NSK0 619 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 FAM32AQ9Y421 112 aaKnown RBP17.97■□□□□ 0.47
CHRD-208ENST00000460627 ALDH1A2O94788 518 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 BGNP21810 368 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 IGFBP4P22692 258 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 GRK3P35626 688 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 DAB2IPQ5VWQ8 1189 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 PHACTR4Q8IZ21 702 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 RASGEF1CQ8N431 466 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 RFWD2Q8NHY2 731 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 LGMNQ99538 433 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 SOX13Q9UN79 622 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 CLDN11O75508 207 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 OR4Q2P0C623 313 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 PBLDP30039 288 aaPredicted RBP17.97■□□□□ 0.47
CHRD-208ENST00000460627 NOMO1Q15155 1222 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 PKN2Q16513 984 aaKnown RBP17.97■□□□□ 0.47
CHRD-208ENST00000460627 KYAT3Q6YP21 454 aaKnown RBP17.97■□□□□ 0.47
CHRD-208ENST00000460627 TAGAPQ8N103 731 aa17.97■□□□□ 0.47
CHRD-208ENST00000460627 MRPL42Q9Y6G3 142 aaKnown RBP17.97■□□□□ 0.47
CHRD-208ENST00000460627 ANKS6Q68DC2 871 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 SRLQ86TD4 932 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 FBXO39Q8N4B4 442 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 TDRD5Q8NAT2 981 aaKnown RBP17.96■□□□□ 0.47
CHRD-208ENST00000460627 OSGEPL1Q9H4B0 414 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 A0A1W2PQH9 124 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 H3BQF6 201 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 KRT6AP02538 564 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 KRT6BP04259 564 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 KRT6CP48668 564 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 WASHC5Q12768 1159 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 ART4Q93070 314 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 CERS2Q96G23 380 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 EFCAB1Q9HAE3 211 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.96■□□□□ 0.47
CHRD-208ENST00000460627 ATG7O95352 703 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 FAM163BP0C2L3 166 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 AQP5P55064 265 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 ACOX1Q15067 660 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.47
CHRD-208ENST00000460627 LLGL2Q6P1M3 1020 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 TNIP2Q8NFZ5 429 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 MCOLN3Q8TDD5 553 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 DQX1Q8TE96 717 aaKnown RBP17.96■□□□□ 0.47
CHRD-208ENST00000460627 PCED1BQ96HM7 432 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 FUBP3Q96I24 572 aaKnown RBP eCLIP17.96■□□□□ 0.47
CHRD-208ENST00000460627 CSPG4P5Q96PW8 444 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 CATSPERZQ9NTU4 200 aa17.96■□□□□ 0.47
CHRD-208ENST00000460627 ADRA1DP25100 572 aa17.96■□□□□ 0.46
CHRD-208ENST00000460627 OTOP2Q7RTS6 562 aa17.96■□□□□ 0.46
CHRD-208ENST00000460627 TFAP2BQ92481 460 aa17.96■□□□□ 0.46
CHRD-208ENST00000460627 ELOVL6Q9H5J4 265 aa17.96■□□□□ 0.46
CHRD-208ENST00000460627 SLC28A3Q9HAS3 691 aa17.96■□□□□ 0.46
CHRD-208ENST00000460627 MDM4O15151 490 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 HADHBP55084 474 aaKnown RBP17.95■□□□□ 0.46
CHRD-208ENST00000460627 YBEYP58557 167 aaPredicted RBP17.95■□□□□ 0.46
CHRD-208ENST00000460627 CDHR5Q9HBB8 845 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 SIX2Q9NPC8 291 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 VPS45Q9NRW7 570 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 GMIPQ9P107 970 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 POTEHQ6S545 545 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 GPR152Q8TDT2 470 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 BBS2Q9BXC9 721 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 MTA2O94776 668 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 PTPN3P26045 913 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 CDCA2Q69YH5 1023 aaPredicted RBP17.95■□□□□ 0.46
CHRD-208ENST00000460627 C2orf15Q8WU43 125 aaKnown RBP17.95■□□□□ 0.46
CHRD-208ENST00000460627 P2RY11Q96G91 374 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 EBNA1BP2Q99848 306 aaKnown RBP17.95■□□□□ 0.46
CHRD-208ENST00000460627 HSD3B7Q9H2F3 369 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 ZDHHC6Q9H6R6 413 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 SNX5Q9Y5X3 404 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 SPACA6W5XKT8 324 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 C5P01031 1676 aa17.95■□□□□ 0.46
CHRD-208ENST00000460627 CDH2P19022 906 aaPredicted RBP17.94■□□□□ 0.46
CHRD-208ENST00000460627 PLPP4Q5VZY2 271 aa17.94■□□□□ 0.46
CHRD-208ENST00000460627 TSEN2Q8NCE0 465 aaKnown RBP17.94■□□□□ 0.46
CHRD-208ENST00000460627 TM6SF2Q9BZW4 377 aa17.94■□□□□ 0.46
CHRD-208ENST00000460627 THAP1Q9NVV9 213 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms