RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 MPP6Q9NZW5 540 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 GGA2Q9UJY4 613 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 A0A0A0MRY4 1105 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 USP27XA6NNY8 438 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 BHMG1C9JSJ3 638 aaPredicted RBP11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 FAM72CH0Y354 149 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 I6L893 689 aaPredicted RBP11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 APOC4-APOC2K7ER74 178 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 CEP104O60308 925 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 CST8O60676 142 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 APOC2P02655 101 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 SRPRAP08240 638 aaKnown RBP11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 TCF4P15884 667 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 DNA2P51530 1060 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 ZXDAP98168 799 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 LMNB2Q03252 620 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 RFTN1Q14699 578 aaPredicted RBP11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 TAZQ16635 292 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 ALFQ53S48 1182 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 FAM72AQ5TYM5 149 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 KAZNQ674X7 775 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC9A4Q6AI14 798 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 FAM72DQ6L9T8 149 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 BBS12Q6ZW61 710 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 NLRP14Q86W24 1093 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 FAM72BQ86X60 149 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 KRT35Q92764 455 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 EDAQ92838 391 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 ZNF599Q96NL3 588 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 FEM1AQ9BSK4 669 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 TLR10Q9BXR5 811 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 CIPCQ9C0C6 399 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 RAB6CQ9H0N0 254 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 TMPRSS4Q9NRS4 437 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 MUTYHQ9UIF7 546 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 SNX12Q9UMY4 172 aa11.29□□□□□ -0.6
SMNDC1-203ENST00000460483 hCG_1818297A0A087WSY0 165 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 KANSL1LA0AUZ9 987 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 HACD1B0YJ81 288 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PGRMC1O00264 195 aaKnown RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 DFFAO00273 331 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 ENC1O14682 589 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 MCF2LO15068 1137 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 DCLK1O15075 740 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 DDX3YO15523 660 aaKnown RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 CNTN5O94779 1100 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 DLDP09622 509 aaKnown RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PYGMP11217 842 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 AMPD1P23109 780 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 IL4RP24394 825 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 ACTN2P35609 894 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 GGCXP38435 758 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 RECQLP46063 649 aaPredicted RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 GALK1P51570 392 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 RENBPP51606 427 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 STARD6P59095 220 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 ECT2LQ008S8 904 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 SFSWAPQ12872 951 aaKnown RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 XRCC4Q13426 336 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 LONRF2Q1L5Z9 754 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PAPD7Q5XG87 772 aaKnown RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 SIX5Q8N196 739 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 ST13P5Q8NFI4 369 aaPredicted RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PCDH19Q8TAB3 1148 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 C16orf45Q96MC5 204 aaPredicted RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PPP1R2P1Q96PQ5 205 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 OSBPL9Q96SU4 736 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 SP110Q9HB58 689 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 KLHL11Q9NVR0 708 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 ELOVL2Q9NXB9 296 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 AMACRQ9UHK6 382 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 PACSIN2Q9UNF0 486 aaPredicted RBP11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 STARD13Q9Y3M8 1113 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 HEY1Q9Y5J3 304 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 SNX10Q9Y5X0 201 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 GREB1Q4ZG55 1949 aa11.28□□□□□ -0.6
SMNDC1-203ENST00000460483 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.6
SMNDC1-203ENST00000460483 XIRP2A4UGR9 3374 aa11.27□□□□□ -0.6
SMNDC1-203ENST00000460483 CFAP69A5D8W1 941 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 C3orf70A6NLC5 250 aaPredicted RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 RASA4BC9J798 803 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms